Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0722 ATGGCTTTCACCTTCTCGCCTTCAATCAGAAACTCCATTTCATGGCCAACTATGCTTGTTCCTGACATGCCTGATATCAATATCTCACTTCGAAATAAAGGCATCTACAAAGGGAAACGCAATATTAATCTGCGAGACTTGACCAAGGCAAATGTTGCAAGTCCATCATTACCTTTGATTGCCCCACCAACACCCGAGGAACGCCCAGGAATCACCCATGACTGCCACCACCACCACCATGTTGCATGGACTAGTATCCCGCAAGAGAGATGGGAAGGAGAGTTACAAGTTCAAGGGCAAATACCATTATGGCTGGAAGGAACGTACCTAAGGAATGGTCCGGGCATGTGGCACATAGGGGACTACAACTTCCGGCACCTCTTCGACGGTTACGCCACCCTGGTGAGGCTCGGTTTCCGGAACGGCCGGCTAGTCGCGGGGCACCGGCAAATCGAGTCGGAGGCGTACCGGGCGGCGAAGAAGAACAAGAAGATATGTTACAGGGAGTTCTCCGAGGTGCCTAAGGCTGCGAATTTCCTGGCCTACGTGGGGGAGCTGGCGAGCCTGTTCTCTGGCGCTTCCCTGACCGACAACGCGAACACCGGCGTGGTGAAACTCGGCGACGGCAGGGTGGTGTGCCTTACGGAGACTCAGAAAGGGTCCATAGTGATAGACCCTGAGACGTTGGAGACAGTGGGGAAGTTTGAGTACAGTGACTCGTTGGGGGGTCTTATTCACTCCGCACATCCCATTGTGACGGATGAAGAGTTTTTGACGTTGTTGCCTGATTTGGTGAGAGCAGGGTACCTTGTTGTTAGGATGGAGCCTGGTACCAATGAGAGGAGGGTCATTGGAAGGGTCAATTGTAGGGGTGGGCCTGCACCTGGTTGGGTTCATTCTTTTCCTGTTACTCAACATTATGTTGTTGTGCCTGAAATGCCGTTGAGGTACTGTGCTCAGAATTTGCTCAAAGCTGAACCTACTCCTTTGTACAAGTTTGAGTGGCACCCTGAATCCAGAGCTTTTATGCATGTAATGTGCAAGACTAGTGGGAAAATTGTGGCAAGTGTGGAAGTGCCTCTGTTTGTTACTTTCCATTTCATAAATGCGTACGAGGAGCAAGATGAAGATGGGAGGGTGACGGCCATTATTGCTGACTGTTGTGAGCACAATTCAGATACTACCATTCTTGATAGGCTTAGGTTGCAGAACCTTCGTTCGTTTAATGGTGAAGATGTTCTACCTGATGCTAGGGTTGGGCGGTTTAGAATACCACTGGATGGAAGTCCATATGGAACATTAGATGCAGCATTGGAGCCGAATGAACATGGGAGAGGCATGGACATGTGCAGCATAAACCCTAATTATTTAGGGAAGAAATACAGATATGCATATGCTTGCGGAGCACAAAGACCTTGTAACTTTCCCAACACCCTCACCAAGCTTGATTTTGAATTAAAGAAGGCTAAGAACTGGCATGAAGAAGGTGCAGTGCCCTCAGAACCCTTCTTTGTGGCACGACCAGGAGCAACAGAGGAAGATGATGGCGTAGTCATCTCCATTGTCAGTGAGAAAAATGGAGAAGGATTTGCGTTGGTGTTAGATGGTTCCACTTTTGAAGAGATTGCTAGGGCCAAATTCCCCTATGGACTTCCATATGGGTTGCATGGATGCTGGGTTCCAAAAGAGTAA 1692 0.4905 MAFTFSPSIRNSISWPTMLVPDMPDINISLRNKGIYKGKRNINLRDLTKANVASPSLPLIAPPTPEERPGITHDCHHHHHVAWTSIPQERWEGELQVQGQIPLWLEGTYLRNGPGMWHIGDYNFRHLFDGYATLVRLGFRNGRLVAGHRQIESEAYRAAKKNKKICYREFSEVPKAANFLAYVGELASLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPETLETVGKFEYSDSLGGLIHSAHPIVTDEEFLTLLPDLVRAGYLVVRMEPGTNERRVIGRVNCRGGPAPGWVHSFPVTQHYVVVPEMPLRYCAQNLLKAEPTPLYKFEWHPESRAFMHVMCKTSGKIVASVEVPLFVTFHFINAYEEQDEDGRVTAIIADCCEHNSDTTILDRLRLQNLRSFNGEDVLPDARVGRFRIPLDGSPYGTLDAALEPNEHGRGMDMCSINPNYLGKKYRYAYACGAQRPCNFPNTLTKLDFELKKAKNWHEEGAVPSEPFFVARPGATEEDDGVVISIVSEKNGEGFALVLDGSTFEEIARAKFPYGLPYGLHGCWVPKE* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0722 563 PANTHER BETA-CAROTENE DIOXYGENASE 75 562 IPR004294 GO:0016702
Gso6g0722 563 Pfam Retinal pigment epithelial membrane protein 88 561 IPR004294 GO:0016702
Gso6g0722 563 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE-RELATED 75 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0722 Gso-Chr6 6660106 6664097 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0722 K17913 - gmx:100794831 1139.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0720 4 7083019 7087236 Gso6g0722 6 6660106 6664097 GST