Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0720 ATGGCTTTCACCACCTTGCCTTCAATCAGAAACTCCATTTCATGCCCAACTATGCTTGTTCCTGACATGCCTCATAACAATATTTCTCTTCGAAATAAAGGCTTCATCTACAAAGGGCAACACGGTATTAATCTCCGAGACTTCACCAAGGCAAATGTTGCAAGTCCATCATTACCTGTGATTGCCCCACCAACACCGGAGGAACGGAAAGAAACCACCGCTGACGACCGCCACCACCACCACCACCACGTTGCATGGACTAGTATCCCGCAAGAGAGGTGGGAAGGAGAGTTACAAGTTCAAGGAAAAATTCCATTATGGCTGAAAGGAACGTACCTAAGGAATGGTCCGGGCATGTGGCACATAGAGGACTACAACTTCCGGCACCTCTTCGATGGTTACGCCACGCTGGTGAGGGTCGGTTTCCAGAACGGGCGGTTAGTCGCCGGGCACCGGCAGATTGAGTCGGAGGCGTACCGGGCGGCGAAGAAGAACAAGAAAATATGTTACCGAGAGTTCTCCGAGGTGCCTAAGGCGGCGAATTTCCTGGCCTACGTGGGGGAGCTGGCGAGCCTGTTCTCCGGCGCGTCGTTGACCGACAACGCGAACACCGGCGTGGTGAAGCTCGGTGACGGCAGGGTGGTTTGCCTGACGGAGACTCAGAAAGGGTCCATAGTGATAAACCCTGAGACGCTGGAGACAGTGGGGAAGTTTGAGTACAGTGACTCATTGGGGGGTCTTATTCACTCTGCACACCCCATTGTGACGGATAACGAGTTTTTGACGTTGTTGCCTGATTTGGTGAGAGCAGGGTACCTTGTGGTGAGGATGGAGCCTGGCACCAATGAGAGAAGGGTCATTGGAAGGGTCAACTGTAGGGGTGGTCCTGCACCTGGTTGGGTCCATTCTTTTCCTGTTACTGAACACTATGTTATTGTGCCTGAAATGCCGTTGAGGTATTGTGCTCAGAATTTGCTCAAGGCTGAGCCTACTCCCTTGTACAAGTTTGAGTGGCACCCTGAGTCCAAAGCTTTTATGCATGCCATGTGCAAGACTAGTGGGAAAATTGTGGCAAGTGTGGAAGTGCCTCTGTTTGTTACTTTCCATTTCATAAATGCGTATGAGGAGCAAGATGAAGATGGGAGGGTGACGGCGATTATTGCCGACTGTTGTGAGCATAATTCCGATACTACCATTCTTGATAGGCTTAGGTTACAGAACCTTCGTTCATTTAATGGTGAAGATGTTCTACCTGATGCTAGGGTTGGTCGGTTCAGAATACCACTGGATGGAAGTCCATATGGAACACTAGAGGCAGCATTGGAGCCAAATGAACATGGGAGAGGCATGGACATGTGCAGCATAAACCCTAATTATTTAGGGAAGAAATATAGATACGCATATGCTTGTGGAGCACAGCGACCTTGTAATTTTCCCAACACCCTCACCAAGCTTGATTTTGAATTGAAGAAGGCTAAGAACTGGCATGAAGAAGGTGCTGTGCCCTCAGAACCCTTCTTTGTGGCACGACCAGGAGCAACAGAGGAAGATGATGGCGTGGTAATCTCCATTGTCAGTGAGAAAAATGGAGAAGGATATGCGTTGCTGTTAGATGGTTCCACCTTTGAAGAGATTGCTAGGGCCAAATTCCCCTATGGACTTCCATATGGGTTGCATGGATGCTGGGTTCCAAAAGAGTAG 1701 0.4944 MAFTTLPSIRNSISCPTMLVPDMPHNNISLRNKGFIYKGQHGINLRDFTKANVASPSLPVIAPPTPEERKETTADDRHHHHHHVAWTSIPQERWEGELQVQGKIPLWLKGTYLRNGPGMWHIEDYNFRHLFDGYATLVRVGFQNGRLVAGHRQIESEAYRAAKKNKKICYREFSEVPKAANFLAYVGELASLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIVINPETLETVGKFEYSDSLGGLIHSAHPIVTDNEFLTLLPDLVRAGYLVVRMEPGTNERRVIGRVNCRGGPAPGWVHSFPVTEHYVIVPEMPLRYCAQNLLKAEPTPLYKFEWHPESKAFMHAMCKTSGKIVASVEVPLFVTFHFINAYEEQDEDGRVTAIIADCCEHNSDTTILDRLRLQNLRSFNGEDVLPDARVGRFRIPLDGSPYGTLEAALEPNEHGRGMDMCSINPNYLGKKYRYAYACGAQRPCNFPNTLTKLDFELKKAKNWHEEGAVPSEPFFVARPGATEEDDGVVISIVSEKNGEGYALLLDGSTFEEIARAKFPYGLPYGLHGCWVPKE* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0720 566 Pfam Retinal pigment epithelial membrane protein 91 564 IPR004294 GO:0016702
Gso4g0720 566 PANTHER BETA-CAROTENE DIOXYGENASE 46 565 IPR004294 GO:0016702
Gso4g0720 566 MobiDBLite consensus disorder prediction 68 83 - -
Gso4g0720 566 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE-RELATED 46 565 - -
Gso4g0720 566 MobiDBLite consensus disorder prediction 56 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0720 Gso-Chr4 7083019 7087236 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0720 K17913 - gmx:100814148 1168.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0720 4 7083019 7087236 Gso6g0722 6 6660106 6664097 GST