Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0716 ATGGAAACACACATGGCATTGGCAACTTCATACATGACTCTTGCACCTAAATATTGCTGCGTTCAGAAACGATCCTTCATCGTAACTTCAGGACTTTCCTCCGCCTTCAAGCCGATCTTAAGAGCGTTGCCTCAAATTCCGCGGCAAATTGATGCTTCCAAAACCTTCACAGACATCAAATCGAAATTTCTTAACGCTGTTGTGGATTCAGCATTTGAGTTTGTCGACCAGCTTGTGCTTCCATCTCAGAATAACTTTGCTCCGGTGGAGGAATTAGGGGAACCCGTGGCTATCACTTATATTGAAGGTGACATACCAGATCACTTTCCAGAGGGTGTCTTCATTAGAAATGGACCAAACCCACTCTTTGGAGGATTGAAATCATCGAAGTCTATCTTGGGGAGGACAAATAGCGTTTGGGTGGAAGGAGAAGGAATGCTTCATGCTTTATATTTCAAAAGGGAAAGTGACAACGGGTGCTGCACCATCGTCTACAACAACAGATACGTTGAAACTGAAACATACAAGCTTGAGAAACAAAGTATCAAGCCTTTGTTTCTCCCTGCTGTAAAAGGAGATACATTCGCCGTTTTGTCTTCTATGCTTCTTAACGGGCTGAGATTTGGACAACTGAATAAAGATTATAGCAACACCAATGTGTTTGAGCATTCAGGCAAGTTCTACTCGGTTTCGGAGAATCACATCCCGCAAGAAATAGACATCTTCACACTAAATACTTTGAAATACTGGGATGTCAATGGAGCATGGAATCGTCCTTTCGCCAGTCACCCCAAGAAAGTTCCAGGCACAGGAGAGCTTGTTATTTTTGGGGTAGATGCAACTAAACCTTATCTTGAAATTGGAATAGTTTCTGCTGATGGAAAGGAATTGGTTCATAAAGAAGACATAAAACTAGACAGATGCTCTTTATGCCATGATATAGGTATCACAAGCAGGTATATAGTGATATTGGATCTTCCACTGATTGTAGATTCAAACAGACTACTTAAAAGAGGCCCATTAATCAAGTATGAGAAGGAGGAATATGCCAGGATTGGGATAATGCCACTCTATGGTGATGAAAACTCAATCCAGTGGTTTGAGGTGGAACCTAATAGCACATTTCATATCATCAATTCCTTTGAGGATGGTCATGAGGTTGTGTTGTGGGGTTGTAGAGCATTAGATTCAATAATTCCAGGACCAGAAGATGGTCTAAATGAATCTAAATTGTTCTCTCGGTGTTATGAATGGCGATTAAACATGAAAAGTGGGGAGGTTAAGGAAAAATATCTCACTGGACCAGAAAAGTTTATGGATTTTCCAGTAATCAATGCAAGTTTTACAGGAATAAAGAATAGATACGGATACACCCAAGTGGTTGATCCCGCTGCAAGTTATTCTGCAGATATTCCTAAATATGGAGCTTTAGCGAAGCTATACTTTGGAGAACCATGTTCAGAATTCCCTGTGGGAGAGACACAACAAGAAGAGCTTATAAGGGTGGAATACCATACGTTTGAAAGGAATGTATTTTGCACTGGATCTGCCTTTGTCCCTAAAGAAGGTGGTATTGAAGAAGATGATGGTTGGATAATCACTTTTGTTCACAATGAAGATACCGGCATATCTCAAGTTCATATAATTGACACAAAGAAGTTTTCTGGCGAGGCAGTTGCCAAAATTACCATGCCTTTCAGAGTTCCATATGGATTTCACGGAGCTTTCATGCCAATCTCCTTTTAG 1746 0.4072 METHMALATSYMTLAPKYCCVQKRSFIVTSGLSSAFKPILRALPQIPRQIDASKTFTDIKSKFLNAVVDSAFEFVDQLVLPSQNNFAPVEELGEPVAITYIEGDIPDHFPEGVFIRNGPNPLFGGLKSSKSILGRTNSVWVEGEGMLHALYFKRESDNGCCTIVYNNRYVETETYKLEKQSIKPLFLPAVKGDTFAVLSSMLLNGLRFGQLNKDYSNTNVFEHSGKFYSVSENHIPQEIDIFTLNTLKYWDVNGAWNRPFASHPKKVPGTGELVIFGVDATKPYLEIGIVSADGKELVHKEDIKLDRCSLCHDIGITSRYIVILDLPLIVDSNRLLKRGPLIKYEKEEYARIGIMPLYGDENSIQWFEVEPNSTFHIINSFEDGHEVVLWGCRALDSIIPGPEDGLNESKLFSRCYEWRLNMKSGEVKEKYLTGPEKFMDFPVINASFTGIKNRYGYTQVVDPAASYSADIPKYGALAKLYFGEPCSEFPVGETQQEELIRVEYHTFERNVFCTGSAFVPKEGGIEEDDGWIITFVHNEDTGISQVHIIDTKKFSGEAVAKITMPFRVPYGFHGAFMPISF* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0716 581 PANTHER OS06G0162550 PROTEIN 32 579 - -
Gso6g0716 581 Pfam Retinal pigment epithelial membrane protein 88 578 IPR004294 GO:0016702
Gso6g0716 581 PANTHER BETA-CAROTENE DIOXYGENASE 32 579 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0716 Gso-Chr6 6573113 6577850 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0716 - - gmx:100817207 1192.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0713 4 6988780 6994915 Gso6g0716 6 6573113 6577850 GST