Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0713 ATGGCATTGGCAGCTTCATACATGACTCTTGCACCTAAATACTGCTGCGTTCAGAAACGACCCTTTATCATAACTTCAGGACTTTCCTCCGCCTTCAAGCCGATCTTAAGAGCGTTGCCTCAAATTCCACTGCAAATTGATGCTTCCAAAACCTTCACAGACATCAAATCGAAATTTCTTAACGCCGTTGTGGATTCAGCATTTGAGTTTGTCGACCAGCTTGTGCTTCCATCTCAGAGTAACTTTGCTCCGGTGGAGGAGTTAGGGGAAGCCGTGGCTATCACTAACATTGAAGGTGACATACCAGATCACTTTCCAGAGGGTGTCTTCATTAGAAATGGACCAAACCCACTCTTTGGAGGATTGAAATCATCCAAGTCTATCTTGGGGAGGACAAATAGCGTGTGGGTGGAAGGAGAAGGAATGCTTCATGCTTTGTATTTCAAAAGGGAAAGTGACGGGTGCTACACCATCGTCTACAACAACAGATATGTTGAAACTGAAACTTACAAGCTTGAGAAACAAAGTGCCAAGCCTTTGTTTCTCCCTGCCGTAAAAGGAGATTCATTGGCCGTTTTGTCTTCTATGCTTCTAAACGGGTTGAGATTTGGACAACTGAATAAAGATTATAGCAACACCAATGTGTTTGAGCATTCGGGCAAGTTCTACTCGGTTTCGGAGAATCACATGCCGCAAGAAATTGACATCTACACACTAAGTACATTGAAATACTGGGATGTCAATGGAGCATGGAATCGTCCTTTCGCCAGTCACCCCAAGAAAGTTCCAGGCACAGGAGAGCTGGTTATTTTTGGCGTAGATGCAACTAAACCTTATCTTGAAATTGGAATAGTTTCTGCTGATGGAAAGGAATTAGTTCATAAAGAAGACATAAAACTAGACAGATGCTCTTTATGCCATGATATAGGTATCACAAGCAGGTATATAGCGATATTGGATCTTCCACTGATTGTAGATTCAAACAGACTACTTAAAAGAGGCCCATTAATCAAGTACGAGAAGGAAAAATATGCCAGGATTGGGATAATGCCACTCTATGGTGATGAAAAATCAACCCAGTGGTTTGAGGTGGAACCTAATAGCACATTTCATATCATCAATTCCTTTGAGGATGGTCATGAGGTTGTGTTGTGGGGTTGTAGAGCATTAGATTCAATAATTCCAGGACCTGAAGATGGTCTAAATGAATCTACGATGTTCTCTCGGTGTTATGAATGGCGATTAAACATAAAAAGTGGGGAGGTTAAGGAAAAATATATCACTGGACCAGAACAGTTTATGGATTTTCCCGTAATTAATGCAAGTTTTACAGGAATTAAGAATAGATACGGATACACACAAGTGGTTGATCCCGCTGCAAGTTATGCTGCAGATATTCCTAAATATGGAGCTTTAGTGAAGCTATACTTTAGAGAACCATGTTCAGAATTTCCAAAGGGAGATACACAACAAAAGCCTATAAGGGTGGAATACCATAGGTTTGAAAGAAACGTATTTTGCACTGGATCTGCCTTTGTCCCTAAAGAAGGTGGTATTGAAGAAGATGATGGTTGGATAATCACTTTTGTTCACAATGAAGATACCGGCATATCTCAAGTTCATATAATTGACTCAAAGAAGTTTTCTGGGGAGGCAGTTGCCAAAATTACCATGCCTTTCAGAGTTCCATATGGATTTCACGGAGCTTTCATGCCACTCTCATTGTAG 1728 0.4097 MALAASYMTLAPKYCCVQKRPFIITSGLSSAFKPILRALPQIPLQIDASKTFTDIKSKFLNAVVDSAFEFVDQLVLPSQSNFAPVEELGEAVAITNIEGDIPDHFPEGVFIRNGPNPLFGGLKSSKSILGRTNSVWVEGEGMLHALYFKRESDGCYTIVYNNRYVETETYKLEKQSAKPLFLPAVKGDSLAVLSSMLLNGLRFGQLNKDYSNTNVFEHSGKFYSVSENHMPQEIDIYTLSTLKYWDVNGAWNRPFASHPKKVPGTGELVIFGVDATKPYLEIGIVSADGKELVHKEDIKLDRCSLCHDIGITSRYIAILDLPLIVDSNRLLKRGPLIKYEKEKYARIGIMPLYGDEKSTQWFEVEPNSTFHIINSFEDGHEVVLWGCRALDSIIPGPEDGLNESTMFSRCYEWRLNIKSGEVKEKYITGPEQFMDFPVINASFTGIKNRYGYTQVVDPAASYAADIPKYGALVKLYFREPCSEFPKGDTQQKPIRVEYHRFERNVFCTGSAFVPKEGGIEEDDGWIITFVHNEDTGISQVHIIDSKKFSGEAVAKITMPFRVPYGFHGAFMPLSL* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0713 575 Pfam Retinal pigment epithelial membrane protein 84 572 IPR004294 GO:0016702
Gso4g0713 575 PANTHER BETA-CAROTENE DIOXYGENASE 28 573 IPR004294 GO:0016702
Gso4g0713 575 PANTHER OS06G0162550 PROTEIN 28 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0713 Gso-Chr4 6988780 6994915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0713 - - gmx:100817207 1106.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0713 4 6988780 6994915 Gso6g0716 6 6573113 6577850 GST