Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0681 ATGGAATATTTCTTGAGAGAAATAGAAGGAAAGCAAGCACATGACCCGTTGTTCATGAACAATTACAACAAGTCGTCGTCATCGTCATCGTCGTTTTCGTCATCATCTTCTTCCACCGTGTGGGTTCATGGGCCTGTGATAGTAGGAGCCGGGCCTTCAGGGCTGGCAGCAGCAGCATGTCTGAGGGACAAAAGTGTCCCAAGCGTGATACTAGAGCGATCCAATTGCATAGCATCTCCATGGCAGCTCAAAACCTATGATCGCTTACGCCTTCACCTTCCAAAGCAATTCTGCGAGCTTCCCTTCATGGGGTTCCCTTCTCACTTCCCAAATTACCCTTCAAAGCAACAGTTTGTACAGTACTTGGAGAATTACGCGGAGAGTTTTGGGATTAGGCCGAGGTTCAATGAGACGGTGCAGCATGCGGAGTTTGACGGCAAACTCGGCTTGTGGCGGGTGAAGAGCGTGGACAAGGTGGGGAAGACGACGGAGTACATGTGCCGGTGGCTGATCGTGGCCACCGGAGAGAATGCGGAGGCGGTGGTGCCGGATATCGAAGGGGTGGAGGAGTTTGGCGCTCCTATAAAACACACAAGCTTGTATAAGAGTGGGGAAGAGTTCAGAGGGAAGAGGGTTTTGGTGGTGGGGTGTGGGAATTCGGGGATGGAAGTGTGCTTAGATCTTTGCAACCATAATGCTACTCCTTCTCTTGTGGTTAGAGACACAGTACACGTCCTACCACGAGAGATGCTGGGAAAATCAACTTTCGGGTTGTCCATGTGGTTGCTCAAGTGGTTACCCATGCGACTTGTCGATCGATTCTTGCTAATGGTGTCATGGCTTCTGCTTGGTGACACTTCTCATTTGGGATTGGATAGGCCTCGTTTGGGTCCCTTAGAACTCAAAAACCTTTCAGGAAAAACCCCTGTGCTAGATGTGGGTACCCTTGCCAAGATTAAAGGTGGAGACATTAAGGTACGTCCAGCCATTAAGCGACTTAAACGTCACACTGTGGAATTCGTGGATGGAAGGACAGAGAATTATGATGCAATCATATTGGCAACTGGTTACAAAAGCAATGTGCCCTATTGGCTTAAGGAAGAAGATATGTTCTCTAAGAAAGATGGGTACCCTAGGAGGCCATTTCCAAATGGGAGGAAAGGTAGAAATGGGCTCTATGCGGTTGGTTTTACCAAAAAGGGTCTACTAGGTGCGTCCATGGATGCAAAGAGAATAGCCGAAGACATTGAACAGTGTTGGGAAACTGGGGCAAATCATAGAACTACTCTTGCTCCTTCACACTTGCCGCAACCAAATTCATAA 1323 0.4845 MEYFLREIEGKQAHDPLFMNNYNKSSSSSSSFSSSSSSTVWVHGPVIVGAGPSGLAAAACLRDKSVPSVILERSNCIASPWQLKTYDRLRLHLPKQFCELPFMGFPSHFPNYPSKQQFVQYLENYAESFGIRPRFNETVQHAEFDGKLGLWRVKSVDKVGKTTEYMCRWLIVATGENAEAVVPDIEGVEEFGAPIKHTSLYKSGEEFRGKRVLVVGCGNSGMEVCLDLCNHNATPSLVVRDTVHVLPREMLGKSTFGLSMWLLKWLPMRLVDRFLLMVSWLLLGDTSHLGLDRPRLGPLELKNLSGKTPVLDVGTLAKIKGGDIKVRPAIKRLKRHTVEFVDGRTENYDAIILATGYKSNVPYWLKEEDMFSKKDGYPRRPFPNGRKGRNGLYAVGFTKKGLLGASMDAKRIAEDIEQCWETGANHRTTLAPSHLPQPNS* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0681 440 Pfam Flavin-binding monooxygenase-like 47 364 IPR020946 GO:0004499|GO:0050660|GO:0050661
Gso6g0681 440 PRINTS Pyridine nucleotide disulphide reductase class-II signature 44 66 - -
Gso6g0681 440 PRINTS Pyridine nucleotide disulphide reductase class-II signature 207 231 - -
Gso6g0681 440 SUPERFAMILY FAD/NAD(P)-binding domain 208 419 IPR036188 -
Gso6g0681 440 PRINTS FAD-dependent pyridine nucleotide reductase signature 45 64 - -
Gso6g0681 440 PRINTS FAD-dependent pyridine nucleotide reductase signature 211 229 - -
Gso6g0681 440 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6 33 427 - -
Gso6g0681 440 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 33 427 - -
Gso6g0681 440 SUPERFAMILY FAD/NAD(P)-binding domain 46 244 IPR036188 -
Gso6g0681 440 Gene3D - 45 424 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0681 Gso-Chr6 6293152 6297488 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0681 K11816 - gmx:100808651 889.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0681 4 6648145 6652652 Gso6g0681 6 6293152 6297488 GST