Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0681 ATGGAATATTTCTTGAGAGAAATAGAAGGAAAGCAAGCACACGACCCGTTGTTCATGAACAACAACAAGTCATCATTGTCGTCATCGTCGTCATCATCTTTTTCCACCGTGTGGGTTCATGGGCCTGTGATAGTAGGAGCCGGGCCTTCAGGACTCGCAGCAGCAGCATGTCTCAGGGAGAAAAGTGTCCCAAGCGTGATACTAGAGCGATCCAATTGCATAGCATCTCTATGGCAGCTCAAAACCTATGATCGCCTACGCCTTCATCTTCCAAAGCAATTCTGCGAGCTTCCCTTCATGGGGTTCCCTTCTCACTTCCCAACATACCCTTCAAAGCAACAGTTTGTACAGTACTTGGAGAATTACGCGGAGAGGTTCGGGATTAGGCCGAGGTTCAATGAGACGGTGCAGCATGCGGAGTTTGATGCGAAACTCGGGTTGTGGCGGGTGAAGAGCGTCGACAAGGCGGAGAAGACGACGGAGTACGTGTGCCGGTGGCTGATCGTGGCCACCGGAGAGAATGCGGAGGCGGTGGTGCCGGATATAGAAGGGGTGGAGGAATTTGGCGCTCCTATAAAACACACGAGCTTGTATAAGAGTGGGGAAGAGTTCAGAGGGAAGAGGGTTTTGGTTGTGGGGTGTGGGAATTCGGGGATGGAAGTGTGCTTAGATCTTTGCAACCATAATGCTACTCCTTCTCTTGTGGTTAGAGACACAGTACACGTCTTACCACGAGAGATGCTGGGAAAATCAACTTTCGGGTTGTCCATGTGGTTGCTTAAGTGGTTACCCATCCGACTTGTGGATCGATTCTTGCTAATGGTGTCATGGCTTCTGCTCGGTGACACTTCTAAATTAGGATTGGATAGGCCGCGTTTGGGTCCCTTAGAACTCAAAAACCTTTCAGGAAAAACCCCTGTGCTAGATGTGGGTACCCTTGCCAAGATTAAAGGTGGAGACATTAAGGTACGTCCAGGCATTAAGCGGCTTAAACGTCAAACTGTGGAATTTGTGGATGGAAGGACAGAGAATTTTGATGCAATCATATTGGCAACTGGTTACAAAAGCAATGTACCCTATTGGCTTAAGGAAGAAGATATGTTCTCTAAGAAAGATGGGTACCCTAGGAGGCCATTTCCAAATGGGTGGAAAGGTAGAAATGGGCTCTATGCTGTTGGTTTTACCAAAAAGGGTCTACTTGGTGCATCCATGGATGCAAAGAGAATAGCTGAAGACATTGAACAGAGTTGGAAAGCTGGGGCAAATCATAGAACTACTTTTGCTCGTTCACACTTGCCGCAACCAAATTCATAA 1314 0.4779 MEYFLREIEGKQAHDPLFMNNNKSSLSSSSSSSFSTVWVHGPVIVGAGPSGLAAAACLREKSVPSVILERSNCIASLWQLKTYDRLRLHLPKQFCELPFMGFPSHFPTYPSKQQFVQYLENYAERFGIRPRFNETVQHAEFDAKLGLWRVKSVDKAEKTTEYVCRWLIVATGENAEAVVPDIEGVEEFGAPIKHTSLYKSGEEFRGKRVLVVGCGNSGMEVCLDLCNHNATPSLVVRDTVHVLPREMLGKSTFGLSMWLLKWLPIRLVDRFLLMVSWLLLGDTSKLGLDRPRLGPLELKNLSGKTPVLDVGTLAKIKGGDIKVRPGIKRLKRQTVEFVDGRTENFDAIILATGYKSNVPYWLKEEDMFSKKDGYPRRPFPNGWKGRNGLYAVGFTKKGLLGASMDAKRIAEDIEQSWKAGANHRTTFARSHLPQPNS* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0681 437 SUPERFAMILY FAD/NAD(P)-binding domain 205 416 IPR036188 -
Gso4g0681 437 Gene3D - 42 421 IPR036188 -
Gso4g0681 437 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6 30 426 - -
Gso4g0681 437 PRINTS FAD-dependent pyridine nucleotide reductase signature 42 61 - -
Gso4g0681 437 PRINTS FAD-dependent pyridine nucleotide reductase signature 208 226 - -
Gso4g0681 437 PRINTS Pyridine nucleotide disulphide reductase class-II signature 41 63 - -
Gso4g0681 437 PRINTS Pyridine nucleotide disulphide reductase class-II signature 204 228 - -
Gso4g0681 437 Pfam Flavin-binding monooxygenase-like 44 361 IPR020946 GO:0004499|GO:0050660|GO:0050661
Gso4g0681 437 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 30 426 - -
Gso4g0681 437 SUPERFAMILY FAD/NAD(P)-binding domain 43 245 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0681 Gso-Chr4 6648145 6652652 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0681 K11816 - gmx:100799546 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0681 4 6648145 6652652 Gso6g0681 6 6293152 6297488 GST