Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0644 ATGCAACCCCAGCAGAGCTCAAGAATTGATTTGGGTGAATTGAGAGCACAGATTGTAAAGAAGCTTGGAGCGGATAAGTCGAAGCGGTACTTTTATTACTTGAACAGGTTTTTGAGTCAGAAGCTGAGCAAGTCCGAGTTTGATAAGTTATGTTTTCGAGTGCTTGGGAGGGAGAATCTTCCATTGCACAATCATTTTATAAAGTCAATTTTGAAGAATGCATGCCAAGCCAAGACCCCACCACCAATCCATCCGCCAGGTCCCCTGAAGTCCGGAGAACATGCTTCAGACATATCTCCTGGCAGAGAAGATGGGCATGAACACAGTGTTGCCAGCTTCCAAAATCAGAATCAGAAAGCACCCATTTGGTCAAATGGGTTTTTGCCGGCATCCCCCAAGGTTAGGTCTGGAGTACGTGAACGGAAGCTGAGAGATAGACCAAGCCCTCTTGGACCAAATGGGAAGGTTGATTCTGTTTCTCACCAATCCATGGGTTCAGAAGACTCTGGTAGTAAGGTTGACATGGAGAATGGAATTCGTACTCCATGTGATTGTCAGAGACCAATACAGCATCTTCAAGCTGTTGCGGAGCTACCTGAGAATGAAAGGGGAGATGCTGTTCGGAGACCTACAGAAAAACCAAGAATACGCGGGAAAGGGCCAGCTGAAATGTCAATTGTTGAAGACGGGGAAGAAGTGGATCAGTTAAGTCGCCTGGGTTTCTCTAGAAGTCCCTTGATAGCACCTCTTGGAATTCCTTACTGCTCAGCAAGTGTAGGGGGAGCCCGCAAAACATTGCCAGTGAGTAGTGCTGGTGATTTTGATAATTGTTGTGACAGTGGTAGGTTGTCTGATACAAATACACTGCAGAGGCGCATGGAGCAGATTGCTGCAGTACAAGGTCTTGGAGCTGTTTCTATGGAATGTGCAAATATGTTGAATAGTATGTTGGATGTGTACTTGAAACGGTTGATCAGGTCTTGTGTTGAATTAGTTGGAGCTAGGTCTACAAATGAGCTGAGGATGCCCCCTGCCCCCAAACAGCAGATGCAGGGTAAGGTCATCAACGGCATGTGGCCAAATAATCATTTACACGTACAGTGTGCTGATGGGTCAGCAGAAGGTGTGCCTGAACACAGACCACCATGCTCAGTTTTTTTGCATGATTTTAAAGTTGCCATGGAGCTAAATCCACGGCAACTTGGAGAAGATTGGCCTTTGCTGATGGAGAAAATATCCATGCAATCGTTTGAGGAATAA 1260 0.4595 MQPQQSSRIDLGELRAQIVKKLGADKSKRYFYYLNRFLSQKLSKSEFDKLCFRVLGRENLPLHNHFIKSILKNACQAKTPPPIHPPGPLKSGEHASDISPGREDGHEHSVASFQNQNQKAPIWSNGFLPASPKVRSGVRERKLRDRPSPLGPNGKVDSVSHQSMGSEDSGSKVDMENGIRTPCDCQRPIQHLQAVAELPENERGDAVRRPTEKPRIRGKGPAEMSIVEDGEEVDQLSRLGFSRSPLIAPLGIPYCSASVGGARKTLPVSSAGDFDNCCDSGRLSDTNTLQRRMEQIAAVQGLGAVSMECANMLNSMLDVYLKRLIRSCVELVGARSTNELRMPPAPKQQMQGKVINGMWPNNHLHVQCADGSAEGVPEHRPPCSVFLHDFKVAMELNPRQLGEDWPLLMEKISMQSFEE* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0644 419 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 1 419 - -
Gso6g0644 419 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 419 IPR024738 GO:0070461
Gso6g0644 419 MobiDBLite consensus disorder prediction 194 218 - -
Gso6g0644 419 MobiDBLite consensus disorder prediction 201 218 - -
Gso6g0644 419 MobiDBLite consensus disorder prediction 110 124 - -
Gso6g0644 419 MobiDBLite consensus disorder prediction 77 174 - -
Gso6g0644 419 MobiDBLite consensus disorder prediction 155 170 - -
Gso6g0644 419 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 4 332 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0644 Gso-Chr6 5964775 5967317 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0644 - - gmx:100819343 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0642 4 6265751 6268489 Gso6g0644 6 5964775 5967317 GST
Gso17g1682 17 31543199 31545923 Gso6g0644 6 5964775 5967317 PCT
Gso6g0644 6 5964775 5967317 Gso17g1682 17 31543199 31545923 PCT