Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1682 ATGCAACCCCGGCTGAGCTCGAGAATCAATTTGGTCGAGTTGAAAGCGCTGATTGTGAAGAGGATTGGAGCGGATAAGTCGAAGCGGTACTTCTATTACTTGAACAAGTTTCTGAGTCAGAAGCTGAGCAAGACCGAATTCGACAGGTCATGTTACCGTGTACTTGGCAGGGAGAATCTTCCGTTACACAATCACTTTATAAAGTCAATTTTGAAGAATGCCTGCCAAGCCAAGACCCCACCGCCAGTTCAGCTGATAGGCCCTCCAAAATCAGGAGCACTTGTCAATAATGTATCTCCTGGTAGAGAGGATGGGCATGAACAGAGTGTCGCTAACTTCCAAAATCAGAATACTTCCATTTGGTCCAATGGGGTTTTGCCGGTTTCCCCACGTAAGTCAAGATCTGGAGTGCGTGATCGGAAGCTTAAAGATAGACCGAGCCCTCTTGGACCAAATGGAAAAGTTGATTCTGTTGCTCATCAATCCACAGCTACAGAAGACAGTGGTAGTAAGGTTGATATGGAGAATGGAATCCTTACTCCATGCGATTATCAGAGACCAATGCAGCATCTTCAGGCAGTTGATGAGCTACCTGAGAATGGTATGGGGGATGTTATTCAAAGACCTGCGGAAAAACCAAGAATGCATGGTAAAGGGCCAACCGAAGTATCAATTGTTGAAGATGGGGAAGAGGTGGAGCAGTTAAACCACCTCAATTTCTCTAGAAGTCCCTTGATAGCACCACTTGGGATTCCTTACTGCACTGCAAGTGTTGGTGGGGCCCGCAAGGCATTGACGGTGAATAGCACTGGTGATTTTGTTAGTTGTTGTGACAGTGGTAGGTTATCTGATACAGATACATTGAGAAGGCGCATGGAGCAGATCGCAACAGTTCAGGGTCTTGGAGGTGTTTCTACAGAATGTGCAAATATGTTGAATAATGTGTTAGATGTGTACTTGAAACGGTTGATAAGGTCTTGTGTTGATTTAGTGGGAGCTAGGTCTGGAAATGAGCCGAGGAAGCTCCCTGTCTCAAAACAGCAGATTCAGGGGAAGGTCATTAATGGCGTCTGGCCAAATAACCATTTACATGTGCAGAGTGCTGGAGGGATGGCAGAACCCGAACCCGAGCCCGAACACAGACCACCGCGCACAGTATCTTTACATGATTTTAAAGTTGCTATGGAGCTAAATCCACAGCAACTTGGAGAAGATTGGCCACTTCAGCTGGAGAAAATCTCTATGCAATCATTTGATGAATAA 1263 0.4576 MQPRLSSRINLVELKALIVKRIGADKSKRYFYYLNKFLSQKLSKTEFDRSCYRVLGRENLPLHNHFIKSILKNACQAKTPPPVQLIGPPKSGALVNNVSPGREDGHEQSVANFQNQNTSIWSNGVLPVSPRKSRSGVRDRKLKDRPSPLGPNGKVDSVAHQSTATEDSGSKVDMENGILTPCDYQRPMQHLQAVDELPENGMGDVIQRPAEKPRMHGKGPTEVSIVEDGEEVEQLNHLNFSRSPLIAPLGIPYCTASVGGARKALTVNSTGDFVSCCDSGRLSDTDTLRRRMEQIATVQGLGGVSTECANMLNNVLDVYLKRLIRSCVDLVGARSGNEPRKLPVSKQQIQGKVINGVWPNNHLHVQSAGGMAEPEPEPEHRPPRTVSLHDFKVAMELNPQQLGEDWPLQLEKISMQSFDE* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1682 420 MobiDBLite consensus disorder prediction 133 147 - -
Gso17g1682 420 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 6 331 IPR024738 GO:0070461
Gso17g1682 420 MobiDBLite consensus disorder prediction 156 170 - -
Gso17g1682 420 MobiDBLite consensus disorder prediction 121 174 - -
Gso17g1682 420 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 1 420 - -
Gso17g1682 420 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 420 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1682 Gso-Chr17 31543199 31545923 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1682 - - gmx:100803746 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g1682 17 31543199 31545923 Gso4g0642 4 6265751 6268489 PCT
Gso17g1682 17 31543199 31545923 Gso6g0644 6 5964775 5967317 PCT
Gso4g0642 4 6265751 6268489 Gso17g1682 17 31543199 31545923 PCT
Gso6g0644 6 5964775 5967317 Gso17g1682 17 31543199 31545923 PCT