Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0637 ATGGGTTACACAAGATCTTCTCTTCTGTCCGTGGCTCTTGTCTTGGCATTCTGTTCAAGCATTCAGGGTTTGGACATCACCAAATTGTTGGGCGAATATCCCGAATATGCACAGTTCAACAAATACCTAACTGAAACCAAGCTGGCGGACCAAATCAACAGCCGTAACGCCGTTACAGTCCTTGCCCTTGACGACGCCGCAATGGCTTCCCTCTCCGGCAAGTCGCAAGACGCCGTTAAGGCCATCCTTAGCACCCATGTGCTCGTCAACTTCTACGACGAGAAGAAGCTGATGGAAGCCGAAGGTAGTCGCACCAAGGTCGAAACCCTATTCCAATCCTCCGGTGTCGCCAAGCCCAACCAGGGTTACATCTACGTGGCGCTCATCAACGAGGGGGAGATTGCGTTCGGTTCCGCCGCCGCCGCACCGAATGCACCTTTCGAGGTTGTGCTTGTGAGGTCCGTGACGAGCCAACCCGACACCGTTTCGGTTCTTCAGGTTAGCAAGCCTATCGTTGCACCTGGCGTTGAATCTGCGGCAGCAGCAGCGACATCTGCTACGGTGCCACTTGCAACAACCGCCGCCGACGGTGCCGGTGATAACATTGCACAGTCACCTTCTGCTTTGGCACCAGGTCCCAGCAGCGATGCTTCCCGCGTCTACATGGGACTCTTTGGTGCTGCTTCCGCCATCGCTTCCCTCGTGATGCTCGCTCTCTAA 720 0.5542 MGYTRSSLLSVALVLAFCSSIQGLDITKLLGEYPEYAQFNKYLTETKLADQINSRNAVTVLALDDAAMASLSGKSQDAVKAILSTHVLVNFYDEKKLMEAEGSRTKVETLFQSSGVAKPNQGYIYVALINEGEIAFGSAAAAPNAPFEVVLVRSVTSQPDTVSVLQVSKPIVAPGVESAAAAATSATVPLATTAADGAGDNIAQSPSALAPGPSSDASRVYMGLFGAASAIASLVMLAL* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0637 239 SUPERFAMILY FAS1 domain 30 114 IPR036378 -
Gso6g0637 239 ProSiteProfiles FAS1/BIgH3 domain profile. 23 153 IPR000782 -
Gso6g0637 239 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 188 IPR033254 -
Gso6g0637 239 Gene3D FAS1 domain 24 168 IPR036378 -
Gso6g0637 239 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 1 188 - -
Gso6g0637 239 Pfam Fasciclin domain 35 109 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0637 Gso-Chr6 5910621 5911556 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0637 - - gmx:100816826 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0635 4 6178466 6179184 Gso6g0637 6 5910621 5911556 GST