Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0635 ATGGGTTACACAAGATCTTCTCTTCTGTTCCTGGCCTTTGTCTTGGCATTATTTTGTTCCACCATTCACGGTTTGGACATCACGAAATTGTTGGGCCAATACCCCGAATATGCCCAGTTCAACAAATACCTCACCGAAACCAAGCTGGCGGATCAAATCAACAGCCTTAACGCCGTTACAGTCCTTGCCCTAGATGACGCCGCGATGGCGTCTCTCTCCGCCAAGCCGCAAGACGCCGTTAAAGCCATCCTCAGCACCCACGTCCTCGTCAACTTCTACGATGAGAAGAAGCTCATGGAAGCCGAAGGAAGCCGCGCCAAGGTGGAAACCCTATTCCAATCCTCCGGCGTCGCCAAGCCCAACCAGGGTTACATCTACGTGGCGCTCATCAACGAGGGAGAGATCGCGTTCGGTTCCGCCGCCGCTGCACCTAATGCACCCTTCGAGGTCGTGTTGGTGAGGTCCGTGACGAGCCAACCCGACGCCGCTTCGATTCTTCAGGTGAGCAAGCCCATCGTTGCACCTGGCGTTGAGTCTGCAGCTTCTGCTACGGTGCCACTTGCAACCGCCGCCGTTGCCGATAACATTGCACAGTCACCTGCTGCTTTGGCACCCGCTCCCAGCAGCGCTTCTCGCGTCTGCATGGAACTCGCTGGTGTGGCTTCTGCCATCGCTTCCCTCGTCATGCTCGCTCTCTAA 699 0.5637 MGYTRSSLLFLAFVLALFCSTIHGLDITKLLGQYPEYAQFNKYLTETKLADQINSLNAVTVLALDDAAMASLSAKPQDAVKAILSTHVLVNFYDEKKLMEAEGSRAKVETLFQSSGVAKPNQGYIYVALINEGEIAFGSAAAAPNAPFEVVLVRSVTSQPDAASILQVSKPIVAPGVESAASATVPLATAAVADNIAQSPAALAPAPSSASRVCMELAGVASAIASLVMLAL* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0635 232 ProSiteProfiles FAS1/BIgH3 domain profile. 24 154 IPR000782 -
Gso4g0635 232 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 211 IPR033254 -
Gso4g0635 232 SUPERFAMILY FAS1 domain 31 111 IPR036378 -
Gso4g0635 232 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 1 211 - -
Gso4g0635 232 Pfam Fasciclin domain 36 110 IPR000782 -
Gso4g0635 232 Gene3D FAS1 domain 25 160 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0635 Gso-Chr4 6178466 6179184 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0635 - - gmx:100797630 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0635 4 6178466 6179184 Gso6g0637 6 5910621 5911556 GST