Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0636 ATGGCGGACGATGACAAAGCGGTTGGGGAAGGTGAGATGAAAGAGACGACGGGTGGTACCAGTCCTTCTGGGAGTGGAAAGAAGAAGAACAAAGGTTTCTTGTTGCGTATTTGGAACGGGATATTTAGGTTACACGGCGATGATTTTGAGAAGAGACTCCAGTACATTTCTAAAGAGGAAGCTCAAGTCATGACTAGAATGAACAGGAGATCCCGATCCTGGAGGAGAATTTCCCGCAATCTTATTGTATTTTCTGTCATATTTGAGGTCGTTGCTGTAGTTTATGCTATTATGACAACTAGATCAATCGATCTGAATTGGAAAATGAGGGCAATCCGGGTTTCACCAATGTTTCTTTTGCCTGCACTAGCAGCTGCTGCCTATACAACATTTGTCAGCTTCACAAGGATGTGTGATCGCAGGGATAAGAAAATTCTTGAAAGGCTTCGAGCTGAAAGGCAAGAAAAAATTGATGAGCTCAAAGAAAGGACAAATTATTACACTACACAACAGCTCATTCAGAGATATGATCCAGACCCAGCTGCAAAAGCAGCTGCTGCAAGTGTTTTAGCATCTAAGTTGGGTGCAGATTCTGGTTTGAAAGTGTACCTGGGAGATGAATCCAGTCCCAGTGCTCCACTGGGGAGGAGCAATGACATTGAAATTGTGCAGTCCTCTGGACTTCGAAATCGGAGACAACTTCAATCTAGATCCACTAGTCCAGGGACAACCACACCAAATTTTGCTGATCAACAACTAGTTGGTCCAGGAGGAATCGATCAAACTCAGACTTTTGAGCTCAATAAGCCTGTTGTTGTTGAACATCACTTACCTCAAAGTTCAACCACACAAGATGGAGGATGGATTGCACGAATTGCAGCTTTACTTGTGGGCGAAGACCCAACACAGTCATATGCGCTCATATGCGGTAACTGCTATATGCATAATGGTCTGGCTCGGAAGGAGGATTTCCCAGTTATCACATACTACTGCCCGCATTGTCATGCCCTGAACAAACCGAAGCAATCAGATGAGCATATCTCTGGTCTTACTTCTCCAAACACGGGGGGGACTCCAAACACAGATGATGGTGTGACGGATGCAGTTAAGAATGCTAGGGCTTCTGCAGCCGAGAGTGTAATCACAAGCAGTAGTCCCGGAAGTGCTTCTAGCTCTGAGATTGAGGAAGTATCAGAAAGGGCAAGCGTGGATGAGAAAATTGATTAA 1227 0.4482 MADDDKAVGEGEMKETTGGTSPSGSGKKKNKGFLLRIWNGIFRLHGDDFEKRLQYISKEEAQVMTRMNRRSRSWRRISRNLIVFSVIFEVVAVVYAIMTTRSIDLNWKMRAIRVSPMFLLPALAAAAYTTFVSFTRMCDRRDKKILERLRAERQEKIDELKERTNYYTTQQLIQRYDPDPAAKAAAASVLASKLGADSGLKVYLGDESSPSAPLGRSNDIEIVQSSGLRNRRQLQSRSTSPGTTTPNFADQQLVGPGGIDQTQTFELNKPVVVEHHLPQSSTTQDGGWIARIAALLVGEDPTQSYALICGNCYMHNGLARKEDFPVITYYCPHCHALNKPKQSDEHISGLTSPNTGGTPNTDDGVTDAVKNARASAAESVITSSSPGSASSSEIEEVSERASVDEKID* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0636 408 MobiDBLite consensus disorder prediction 226 249 - -
Gso6g0636 408 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 16 404 - -
Gso6g0636 408 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 288 338 IPR019273 -
Gso6g0636 408 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 16 404 IPR040115 GO:0071786
Gso6g0636 408 MobiDBLite consensus disorder prediction 341 408 - -
Gso6g0636 408 Coils Coil 143 163 - -
Gso6g0636 408 MobiDBLite consensus disorder prediction 1 28 - -
Gso6g0636 408 MobiDBLite consensus disorder prediction 344 365 - -
Gso6g0636 408 MobiDBLite consensus disorder prediction 376 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0636 Gso-Chr6 5900577 5904864 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0636 K23292 - gmx:100816305 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0633 4 6164233 6168681 Gso6g0636 6 5900577 5904864 GST
Gso14g1077 14 18780718 18787994 Gso6g0636 6 5900577 5904864 PCT
Gso6g0636 6 5900577 5904864 Gso14g1077 14 18780718 18787994 PCT