Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1077 ATGGGGGATGAGAAAGGTGAGAAGAAAGAAACTAGTCCCAGTGCCAGTGCCAGTGCCGGGAACGATAAGAAGAACGAGAAAAAGAAGAAAGGTTTTATTTCGCGAATTTGGAACGCGATATTCAGGTCCAACCGCGACGATTTTGAGAAGAGGCTTCAGTATATTTCCAAAGAGGAAAACGCGGTTGTGACTAGAATGAGCAATAGATCTCGCTCTTGGAGGCGAACCTCTCGCCAACTTATTCTATTCTCTGTTTTATTTGAGGTCATTGCTGTAGGATATGCTATTATGACAACAAGATCAATGGATATGAATTGGAAAATGAGGGCAATCCGAGTTTTGCCAATGTTTCTTTTGCCTGCCTTGTCATCAGCTACATATACTGCATTTGTCAGCTTCACCAGGATGTGTGATCGCAGGGACCAGAAAATTCTTGAAAGTCTTAGAGCTGAAAGGAAGGCAAAAATTGATGAGCTCAAAGAGAAGACAAATTATTACATTACTCAACAACTCATTCAGAGATATGATACAGATCCTGCAGCCAAGGCAGCTGCTGCAACTGCTTTAGCATCCAAGTTGGGTGCAGATTCAGGTTTGAAAGTGTATGTGGGGGATGAATCTTCTGGTGCTTCAACAGGGAAGACCAAGGATGTTGAAGTTGTTCAGTCTAGTGGGCTTCGAAATCGCAAACAAGTCACTTCTAGATCCACTAGTTCAGGGACAACTACACCAAATTATTCTGATCAACAATTTGTTGGTTCTGGGAAAATTGATCAAACCCAAACTCCTGAGCATAATCAGCTTGTAGTTGTTGAACATCACAATCCTCAAAGTTCAACAATGAATGATGGAGGATGGATTGCTCGAATTGCAGCATTGCTTGTGGGTGAGGATCCAACACAGTCTTATGCGCTCGTATGCGGTAACTGCCGCATGCATAATGGTCTTGCTCGGAAGGAGGATTTCCCATTTATTACTTATTACTGCCCACATTGTCACGCCCTGAACAAACCAAAGCAATCGGATGAGCGTACATCTGGTTTAAATTCCCAAAACACTCAGTCTCCTAAAGCAGATGACAGGGAAGAAGTTAAAAATGCTAGTGATTCTGAATCCGAGAGTGTAATAAGAAGCGATAATCCCGTAAATACTAGCCCTGAGATTGAGGAAGTTTCTGAACCGGCTATTTCAGTGGAGAAAAACTAG 1206 0.4254 MGDEKGEKKETSPSASASAGNDKKNEKKKKGFISRIWNAIFRSNRDDFEKRLQYISKEENAVVTRMSNRSRSWRRTSRQLILFSVLFEVIAVGYAIMTTRSMDMNWKMRAIRVLPMFLLPALSSATYTAFVSFTRMCDRRDQKILESLRAERKAKIDELKEKTNYYITQQLIQRYDTDPAAKAAAATALASKLGADSGLKVYVGDESSGASTGKTKDVEVVQSSGLRNRKQVTSRSTSSGTTTPNYSDQQFVGSGKIDQTQTPEHNQLVVVEHHNPQSSTMNDGGWIARIAALLVGEDPTQSYALVCGNCRMHNGLARKEDFPFITYYCPHCHALNKPKQSDERTSGLNSQNTQSPKADDREEVKNASDSESESVIRSDNPVNTSPEIEEVSEPAISVEKN* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1077 401 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 286 336 IPR019273 -
Gso14g1077 401 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 15 398 - -
Gso14g1077 401 MobiDBLite consensus disorder prediction 373 387 - -
Gso14g1077 401 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 15 398 IPR040115 GO:0071786
Gso14g1077 401 MobiDBLite consensus disorder prediction 208 260 - -
Gso14g1077 401 Coils Coil 142 162 - -
Gso14g1077 401 MobiDBLite consensus disorder prediction 341 355 - -
Gso14g1077 401 MobiDBLite consensus disorder prediction 356 372 - -
Gso14g1077 401 MobiDBLite consensus disorder prediction 206 260 - -
Gso14g1077 401 MobiDBLite consensus disorder prediction 338 401 - -
Gso14g1077 401 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1077 Gso-Chr14 18780718 18787994 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1077 K23292 - gmx:100796079 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1077 14 18780718 18787994 Gso4g0633 4 6164233 6168681 PCT
Gso14g1077 14 18780718 18787994 Gso6g0636 6 5900577 5904864 PCT
Gso4g0633 4 6164233 6168681 Gso14g1077 14 18780718 18787994 PCT
Gso6g0636 6 5900577 5904864 Gso14g1077 14 18780718 18787994 PCT