Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0617 ATGGTTTTTCCTTCCTCCTCCCTCTCCCTCTTCTTCCCCATTCCCACTCTGCTTCCTAATAACCTTATCTTCAGAAACAATACCAGGGCAATCCTTAATCAACACAAATGCCCATTCTCCGAGGAAAGACCACGCTTTTCATGTTGTGCTCTAAAACCCACTTCACAAAACAGGATTTTTAGAAGGGATTTGATGCTGTTAGGCCTTACTTCGTTATCTCCAACAATGCCACTTTCAGTGACACTTGCGGAAGAAGAACCAAAAATGGCTTCATTTCTTGACGAAATAAATGCCTATTCTTATATGTACCCTGTTGAGTTACCTTCCGATAATTTTACCTTCAAATGGATTGAATCCCGAAAGCCAGAACGATATTCATCAGCTGCACCACTTTCTCCTGATGCACGCCTGCGCATTGTGTCTGAGCGTCTTGACTTTATTGATAATGTCATCATTTCTGTCACGATAGGTCCACCAAATTCAAGCTATATAAAATCAAAGGATAAGAGTAAATGGACTGCAAAAGATGTTGCTGATTCAGTTTTAGCTGACAGATCTTCCCTGCGAGTTACCTCAAGTCAGCGCTTAGAAGAGAGTTCGGTTCTTAATACCCATTCTAGTGAAATTGATGGTGAGATGTACTGGTATTATGAATACCTTGTTCGTAAAGCACCTTTGAGACTTACCGACGAATCAAGCACTTACAGGCATTATCTTGCTTCAACAGCTGAAAGAGATGGTTATTTGTACTCTATCAGTGCTTCAACCGTCAGCCCTCTGTGGGAAAAACTGGGGCCTTTCCTTGATAAAGCGGTGAATTCGTTTCGTCTTCTTAGCCCAACAGAAAATTATGTTCCTCCGTACAAAGATCCCTGGAGATTTTGGTGA 888 0.4167 MVFPSSSLSLFFPIPTLLPNNLIFRNNTRAILNQHKCPFSEERPRFSCCALKPTSQNRIFRRDLMLLGLTSLSPTMPLSVTLAEEEPKMASFLDEINAYSYMYPVELPSDNFTFKWIESRKPERYSSAAPLSPDARLRIVSERLDFIDNVIISVTIGPPNSSYIKSKDKSKWTAKDVADSVLADRSSLRVTSSQRLEESSVLNTHSSEIDGEMYWYYEYLVRKAPLRLTDESSTYRHYLASTAERDGYLYSISASTVSPLWEKLGPFLDKAVNSFRLLSPTENYVPPYKDPWRFW* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0617 295 SUPERFAMILY Mog1p/PsbP-like 91 277 IPR016123 -
Gso6g0617 295 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 77 277 - -
Gso6g0617 295 Pfam PsbP 152 276 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Gso6g0617 295 PANTHER - 25 295 - -
Gso6g0617 295 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 5, CHLOROPLASTIC 25 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0617 Gso-Chr6 5716495 5721437 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0617 - - gmx:100809891 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0617 4 5985952 5990709 Gso6g0617 6 5716495 5721437 GST