Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0617 ATGGTTTTTCCTTCTTCCTCCCTCTCCCTCCCCCTCTCGTTCTTCCCCATTCCCACTCTGCTACCTAATAACCTCATCTTCAGAAACAATAACTGGACAATCCTTAACCAACGCAAATGCCCATTGTCCGAGGAAAGACCACGCTTTTCATGTTGTGCTCTAAAACCCACTTCACAAAACAGGATTTTTAGAAGGGATTTGATGCTGTTGGGGCTTACTTCGCTCTCTCTACCAATGCCACTTTCAGTGACTCTTGCTGAAGAAGAACCGAAAATGGCTTCATTTCTTGATGAAATAAATGCCTATTCTTATATGTACCCTGTTGAGTTGCCTTCCGATAATTTTTCCTTCAAATGGATTGAATCCAGAAAGCCTGAACGATATTCATCAGCAGCACCACTTTCTCCTGATGCACGCCTGCGCATTGTGTCTGAGCGTGTTGACTTTATTGATAATGTTATCATTTCTGTCACGATAGGTCCACCAAATTCAAGCTATATAAAATCAAAGGATAAGAGTGAATGGACTGCAAAAGATGTTGCTGATTCAGTTTTAGCTGACAGATCTTCACTGCGAGTTACTTCAAGTCAGCGCTTAGAAGAGAGTTCAGTCCTTAATACTCATTCTAGTGAAATTGATGGTGAGATGTACTGGTATTATGAGTACCTTGTTCGTAAAGCACCTTTGAGACTTACTGATGAATCAAGCACTTACAGGCATTATCTTGCTTCAACAGCTGAAAGAGATGGTTATTTGTACTCTATCAGTGCTTCAACCGTCAGCCCTCGGTGGGAAAAACTCGGTCCTTTCCTTGATAAAGCGGCGTGA 828 0.4203 MVFPSSSLSLPLSFFPIPTLLPNNLIFRNNNWTILNQRKCPLSEERPRFSCCALKPTSQNRIFRRDLMLLGLTSLSLPMPLSVTLAEEEPKMASFLDEINAYSYMYPVELPSDNFSFKWIESRKPERYSSAAPLSPDARLRIVSERVDFIDNVIISVTIGPPNSSYIKSKDKSEWTAKDVADSVLADRSSLRVTSSQRLEESSVLNTHSSEIDGEMYWYYEYLVRKAPLRLTDESSTYRHYLASTAERDGYLYSISASTVSPRWEKLGPFLDKAA* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0617 275 SUPERFAMILY Mog1p/PsbP-like 94 271 IPR016123 -
Gso4g0617 275 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 5, CHLOROPLASTIC 27 274 - -
Gso4g0617 275 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 80 275 - -
Gso4g0617 275 Pfam PsbP 94 273 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Gso4g0617 275 PANTHER - 27 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0617 Gso-Chr4 5985952 5990709 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0617 - - gmx:100776365 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0617 4 5985952 5990709 Gso6g0617 6 5716495 5721437 GST