Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0586 ATGAACAGACCAGGAGATTGGAACTGCAGGACATGCAACCACCTGAACTTCCAGAGAAGAGAATCATGTCAGCGATGCGGGGAGCCGAGGAGTGGCGGCGGCGACTACGGTGGCGGCTTCGGTGGGGGCAGAGGCTCTTCCTCCTTTGGCGGATTCACCACTGGCCCGGATGTTCGCCCCGGTGACTGGTACTGCACCGTCGGAAACTGTGGAGCCCACAACTTTGCCAGCCGCTCCAGCTGCTTCAAGTGCGGTGCCCCCAAGGAGGACTCCTCCGCCGGCCCATTCGACGTCGACATGCCCCGAATGAGACCCTTCGGCTTTGGCGGCAGCGGCGGCGGCGGCTCCTCTGCTCGCCCTGGCTGGAAATCCGGTGACTGGATATGCACCAGGTCAGGATGCAACGAGCATAACTTCGCCAATAGAATGGAGTGCTACCGATGCAATGCACCGAGGGACTCTAGTAGTGCCAGGTCTCCCTATTCATCGTAG 492 0.6077 MNRPGDWNCRTCNHLNFQRRESCQRCGEPRSGGGDYGGGFGGGRGSSSFGGFTTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDSSAGPFDVDMPRMRPFGFGGSGGGGSSARPGWKSGDWICTRSGCNEHNFANRMECYRCNAPRDSSSARSPYSS* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0586 163 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Gso6g0586 163 PANTHER RAN BP2/NZF ZINC FINGER-LIKE SUPERFAMILY PROTEIN 1 156 - -
Gso6g0586 163 ProSiteProfiles Zinc finger RanBP2 type profile. 59 90 IPR001876 -
Gso6g0586 163 SUPERFAMILY Ran binding protein zinc finger-like 55 91 IPR036443 -
Gso6g0586 163 SUPERFAMILY Ran binding protein zinc finger-like 2 32 IPR036443 -
Gso6g0586 163 ProSitePatterns Zinc finger RanBP2-type signature. 63 84 IPR001876 -
Gso6g0586 163 ProSiteProfiles Zinc finger RanBP2 type profile. 123 154 IPR001876 -
Gso6g0586 163 Gene3D - 55 91 - -
Gso6g0586 163 Gene3D - 2 33 - -
Gso6g0586 163 Gene3D - 116 155 - -
Gso6g0586 163 SMART zf_4 125 151 IPR001876 -
Gso6g0586 163 SMART zf_4 5 29 IPR001876 -
Gso6g0586 163 SMART zf_4 61 87 IPR001876 -
Gso6g0586 163 ProSitePatterns Zinc finger RanBP2-type signature. 127 148 IPR001876 -
Gso6g0586 163 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Gso6g0586 163 PANTHER ZINC FINGER PROTEIN 1 156 - -
Gso6g0586 163 Pfam Zn-finger in Ran binding protein and others 59 90 IPR001876 -
Gso6g0586 163 Pfam Zn-finger in Ran binding protein and others 3 30 IPR001876 -
Gso6g0586 163 Pfam Zn-finger in Ran binding protein and others 123 152 IPR001876 -
Gso6g0586 163 SUPERFAMILY Ran binding protein zinc finger-like 116 155 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0586 Gso-Chr6 5420458 5422847 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0586 - - gmx:100799240 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0588 4 5683713 5686087 Gso6g0586 6 5420458 5422847 GST