Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0588 ATGAGCAGACCAGGAGATTGGAACTGCAGGACATGCAACCACCTGAACTTCCAGAGAAGAGAGTCGTGCCAGCGATGCGGGGAGCCTAGGAGTGGTGGCGGCGGCGACTACGGCGGAGGCTTCGGTGGTGGCAGAGGCTCTTCCTCCTTTGGCTTCACCACTGGCCCGGATGTTCGCCCCGGTGACTGGTACTGCACCGTCGGAAACTGTGGAGCCCACAACTTCGCCAGCCGCTCCAGCTGCTTCAAGTGCGGTGCCCCCAAGGAGGACTCCTCCGCCGGACCATTCGACGCCGACATGCCTCGAATGAGACCATACGGCTTCGGCGGCGGCTCCTCCGCCCGTCCTGGCTGGAAGTCCGGCGACTGGATATGCACCAGGTCTGGATGCAACGAGCATAACTTCGCCAATAGAATGGAGTGTTACCGATGCAATGCACCGAGGGACTCTAGTAGTGCCAGGTCTCCCTATTCATCGTAG 480 0.6083 MSRPGDWNCRTCNHLNFQRRESCQRCGEPRSGGGGDYGGGFGGGRGSSSFGFTTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDSSAGPFDADMPRMRPYGFGGGSSARPGWKSGDWICTRSGCNEHNFANRMECYRCNAPRDSSSARSPYSS* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0588 159 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Gso4g0588 159 ProSiteProfiles Zinc finger RanBP2 type profile. 59 90 IPR001876 -
Gso4g0588 159 SUPERFAMILY Ran binding protein zinc finger-like 2 32 IPR036443 -
Gso4g0588 159 Gene3D - 2 33 - -
Gso4g0588 159 Gene3D - 112 151 - -
Gso4g0588 159 Gene3D - 54 91 - -
Gso4g0588 159 Pfam Zn-finger in Ran binding protein and others 119 148 IPR001876 -
Gso4g0588 159 Pfam Zn-finger in Ran binding protein and others 3 30 IPR001876 -
Gso4g0588 159 Pfam Zn-finger in Ran binding protein and others 59 90 IPR001876 -
Gso4g0588 159 SUPERFAMILY Ran binding protein zinc finger-like 112 151 IPR036443 -
Gso4g0588 159 ProSitePatterns Zinc finger RanBP2-type signature. 63 84 IPR001876 -
Gso4g0588 159 SUPERFAMILY Ran binding protein zinc finger-like 55 91 IPR036443 -
Gso4g0588 159 PANTHER RAN BP2/NZF ZINC FINGER-LIKE SUPERFAMILY PROTEIN 1 152 - -
Gso4g0588 159 ProSiteProfiles Zinc finger RanBP2 type profile. 119 150 IPR001876 -
Gso4g0588 159 ProSitePatterns Zinc finger RanBP2-type signature. 123 144 IPR001876 -
Gso4g0588 159 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Gso4g0588 159 SMART zf_4 121 147 IPR001876 -
Gso4g0588 159 SMART zf_4 5 29 IPR001876 -
Gso4g0588 159 SMART zf_4 61 87 IPR001876 -
Gso4g0588 159 PANTHER ZINC FINGER PROTEIN 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0588 Gso-Chr4 5683713 5686087 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0588 - - gmx:100811107 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0588 4 5683713 5686087 Gso6g0586 6 5420458 5422847 GST