Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0565 ATGGCTCCGACGACGATCCGGAAGGCGATTGGGGTGGTGAAGGACCAGACCAGCATAGGAATAGCCAAGGTCGCAAGCAACATGGCGCCGGAGATGGAGGTCGCGATTGTGAAGGCGACGAGCCACGATGACGACCCTGCCAGCGACAAGTACATAAGGGAGATCTTGAACCTCATGTCTCACTCTCGCGGCTACGTCCACGCGTGTGTCACCGCCGTGTCCAAGCGGTTGGGTAAGACGCGCGACTGGATTGTGGCCCTCAAGGCGCTGATGCTCGTGCACAGGCTCATGAACGATGGTCCGCCGCTCTTCCAGGAGGAGATCCTCTACGCCACCCGCAGGGGAACCAGGCTCCTCAACATGTCTGATTTCAGAGACGAGGCTCACTCTAGCTCCTGGGATCACTCCGCTTTTGTCAGGACCTATGCTTTGTATCTCGATCAGAGGCTTGAATTGATGCTGTTCGATAGAAAAGGCACAGTCTCCGCCGCCAATGGTGGCGGTGATGATAGGTTTGGCGGAAGAGACAATTTCCAGTCACCGCCGTATGAGTACGGCGGTGGTGAATTTAGAGGGGAAGGCGCTTATGGGAATGGGATGAGGAAGACAAGATCGTATGGGGACATGAGTGAATCGGTGGGGAGAGGGGAAGAAAAGAGGGTTGTGAGTGTGACTCCGTTGAGGGATATGACGCCGGAGAGGGTATTCGGGAAGATGGGTCATTTGCAGAGGCTGTTGGATCGGTTTTTGGCTTGTAGGCCTACTGGGTTGGCTAAGAATAGTAGGATGGTTTTGATTGCGTTGTATCCTGTTGTCAAGGAGAGTTTTCAGTTGTATGCTGATATATGTGAGGTTTTGGCTGTGTTGCTTGACAAGTTCTTTGATATGGAGTATGCTGATTGTGTGAAGGCTTTTGATGCTTACGCCAGTGCAGCAAAGCAGATTGATGAGCTGGTTGCTTTTTACAATTGGTGTAAGGATACTGGTGTGGCGAGGTCCTCAGAGTATCCTGAGGTTCAGAAGATTACCAGCAAGTTGCTTGAGACGTTGGAGGAATTTGTGAGGGATAGGGCCAAGAGGCCAAAGAGTCCCGAGAGAAAAGAGGAGGCTCCACCAGTGGAGAAGGTAGAGGAGGAGCCAGCACCAGATATGAATGAAATCAAGGCACTGCCTCCGCCGGAGAATTATACTCCGCCTCCTCCGCCTGAGCCGGAGCCCAAGCCACAGCCACAGGTTACGGAGGATTTGGTGAATCTGAGAGACGACGCAGTCACTGCAGATGATCAGGGAAATAAATTTGCTTTAGCACTCTTTGCTGGTGCACCTGCTAATAATGCAAATGGATCATGGGAAGCCTTCCCGTCAAATGGACAGCCAGAAGTGACTTCAGCCTGGCAAACCCCGGCAGCAGAGCCTGGGAAAGCTGATTGGGAATTGGCATTGGTAGAGACTGCTAGCAATTTGTCAAAGCAGAAGGCAGCTTTAGGTGGTGGGTTGGATCCTCTATTGTTGACTGGTATGTATGATCAAGGAATGGTGAGGCAGCATGTCAGCACTACCCAACTGAGTGGTGGGAGTGCAAGCAGTGTGGCATTGCCGGGACCAGGGAAGACTCCGGTTTTGGCTCTCCCCGCCCCAGATGGATCTGTGCAGCCGGTTAATCAGGATCCATTTGCTGCATCGCTGAGTGTTCCACCACCATCCTATGTGCAAATGGCTGATATGGAGAAGAAGCAGCACTTGCTTGTGCAGGAGCAGCAGGTGTGGCATCAGTATGCAAGGGATGGGATGCAAGGTCAATCTAGCTTGGCCAAACTGAATGGCGCTGGATACTATGCCGGAGGTCCTATGCCCATGATGCCTTATGGGATGCCCCCAGTTAATGGAATGGGACCTCCAACCGGGTATTATCACACTCCTTACTGA 1926 0.5254 MAPTTIRKAIGVVKDQTSIGIAKVASNMAPEMEVAIVKATSHDDDPASDKYIREILNLMSHSRGYVHACVTAVSKRLGKTRDWIVALKALMLVHRLMNDGPPLFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYALYLDQRLELMLFDRKGTVSAANGGGDDRFGGRDNFQSPPYEYGGGEFRGEGAYGNGMRKTRSYGDMSESVGRGEEKRVVSVTPLRDMTPERVFGKMGHLQRLLDRFLACRPTGLAKNSRMVLIALYPVVKESFQLYADICEVLAVLLDKFFDMEYADCVKAFDAYASAAKQIDELVAFYNWCKDTGVARSSEYPEVQKITSKLLETLEEFVRDRAKRPKSPERKEEAPPVEKVEEEPAPDMNEIKALPPPENYTPPPPPEPEPKPQPQVTEDLVNLRDDAVTADDQGNKFALALFAGAPANNANGSWEAFPSNGQPEVTSAWQTPAAEPGKADWELALVETASNLSKQKAALGGGLDPLLLTGMYDQGMVRQHVSTTQLSGGSASSVALPGPGKTPVLALPAPDGSVQPVNQDPFAASLSVPPPSYVQMADMEKKQHLLVQEQQVWHQYARDGMQGQSSLAKLNGAGYYAGGPMPMMPYGMPPVNGMGPPTGYYHTPY* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0565 641 CDD ANTH_N_AP180_plant 33 152 - -
Gso6g0565 641 MobiDBLite consensus disorder prediction 392 409 - -
Gso6g0565 641 SUPERFAMILY GAT-like domain 226 356 - -
Gso6g0565 641 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 618 IPR045192 GO:0048268|GO:0072583
Gso6g0565 641 MobiDBLite consensus disorder prediction 355 384 - -
Gso6g0565 641 PANTHER ENTH/ANTH/VHS SUPERFAMILY PROTEIN-RELATED 1 618 - -
Gso6g0565 641 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Gso6g0565 641 Gene3D - 2 156 IPR008942 -
Gso6g0565 641 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Gso6g0565 641 MobiDBLite consensus disorder prediction 355 412 - -
Gso6g0565 641 SMART enth_2 30 160 IPR013809 -
Gso6g0565 641 Gene3D ANTH domain 219 367 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Gso6g0565 641 Pfam ANTH domain 32 356 IPR011417 GO:0005543
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0565 Gso-Chr6 5234388 5237122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0565 - - gmx:100787076 1172.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0568 4 5501415 5504102 Gso6g0565 6 5234388 5237122 GST