Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0568 ATGGCTCCGACCACGATCCGGAAGGCGATTGGGGTGGTGAAGGACCAGACAAGCATCGGGATAGCGAAGGTTTCGAGCAACATGGCGCCGGAGATGGAGGTCGCGATTGTGAAGGCGACGAGCCATGACGACGACCCCGCGAGCGAGAAGTACATAAGGGAGATCTTGAACCTCATGTCCCACTCGCGTGGCTACGTCCACGCGTGTGTCACCGCCGTGTCCAAGCGTTTGGGGAAGACGCGCGACTGGATTGTGGCGCTCAAGGCGCTGATGCTCGTGCACAGGCTCATGAACGAGGGCCCGCCGCTGTTCCAGGAGGAAATCCTCTTCGCCACCCGCAGGGGAACCAGGCTCCTCAACATGTCTGATTTCAGAGATGAGGCTCACTCCAGCTCCTGGGATCACTCCGCTTTTGTGAGGACCTATGCTATGTATCTAGATCAGAGGCTTGACTTGATGCTCTTTGATAGAAAAAGCACCGCCGCCTCCTATGGTGGCGGTGCGGGTAGTGTTGGCGGTGGCGGCAGTGATGATAGATTTGGCGGAAGAGACAATTTCCAGTCACCGCCGTATGAGTACGGCGGTGGTGGTGAATTTAGAGGGGAAGGCGGCTATGGGAATGGGATGAGGAAGACGAGATCGTATGGGGACATGAGTGAATCGGTGGGGAGAGGGGAAGAGAAGAGGGTTGTGAGTGTGACTCCGCTGAGGGATATGACGCCAGAGAGGGTTTTCGGGAAGATGGGACATTTGCAGAAGTTGTTGGATCGGTTTTTGGCTTGTAGGCCTACTGGGTTGGCTAAGAATAGCAGGATGGTTTTGATTGCGCTGTATCCTGTGGTTAAGGAGAGTTTTCAGTTGTATGCTGATATATGTGAGGTTTTGGCTGTGTTGCTTGATAAGTTCTTTGATATGGACTATGCTGATTGTGTGAAGGCTTTTGATGCTTATTCTAGTGCGGCTAAACAAATTGATGAGTTGGTTGCATTTTACAATTGGTGTAAGGATACCGGTGTGGCGAGGTCCTCGGAGTACCCTGAGGTTCAGAGGATTACCAATAAGTTGCTTGAGACATTGGAGGAGTTTGTGAGGGATAGGGCCAAGAGGCCAAAGAGTCCGGAGAGGAAAGAGGAGGTTCCGCCGGTGGAGAAGGTAGAGGAGGAGCCGGCCCCGGATATGAATGAAATCAAGGCACTGCCACCACCAGAGAATTATATCCCACCTCCTCCGCCTGAGCCAGAGCCTAAGCCGCAGCCACAGGTTACGGAGGATTTGGTGAATCTGAGAGACGATGCAGTTACTGCAGATGATCAGGGAAATAAATTGGCTTTGGCACTCTTTGCTGGTGCACCTGCTAATAATGTAAATGGATCATGGGAAGCCTTCCCATCAAATGGACAGCCAGAAGTGACTTCAGCCTGGCAAACCCCAGCTGCAGAGCCCGGGAAAGCTGATTGGGAATTGGCATTGGTAGAGACTGCTAGCAATTTGTCAAAGCAGAAGGCAACTTTAGGTGGTGGGTTTGATCCTCTATTGTTGACTGGCATGTATGATCAAGGAATGGTGAGGCAGCATGTCAGCACTACCCAACTGAGTGGAGGGAGTGCAAGCAGTGTGGCATTGCCAGGACCTGGGAAGACTACAACCCCTGTGTTGGCTCTCCCCGCCCCGGATGGATCCGTGCAGCCAGTTAATCAGGATCCATTTGCCGCATCGCTGAGTGTTCCACCACCGTCCTATGTCCAAATGGCTGATATGGAGAAGAAGCAGCACTTGCTTGTGCAGGAGCAGCAGGTGTGGCATCAGTATGCTAGGGATGGGATGCAAGGTCAATCTAGCTTGGCCAAACTGAATGGCGCTGGATACTATGCCGGAGGTCCTATGCCCATGATGCCTTATGGAATGCCCCCAGTCAATGGAATGGGGCCTCCAACCGGGTATTATCACACTCCTTACTGA 1959 0.5283 MAPTTIRKAIGVVKDQTSIGIAKVSSNMAPEMEVAIVKATSHDDDPASEKYIREILNLMSHSRGYVHACVTAVSKRLGKTRDWIVALKALMLVHRLMNEGPPLFQEEILFATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLDLMLFDRKSTAASYGGGAGSVGGGGSDDRFGGRDNFQSPPYEYGGGGEFRGEGGYGNGMRKTRSYGDMSESVGRGEEKRVVSVTPLRDMTPERVFGKMGHLQKLLDRFLACRPTGLAKNSRMVLIALYPVVKESFQLYADICEVLAVLLDKFFDMDYADCVKAFDAYSSAAKQIDELVAFYNWCKDTGVARSSEYPEVQRITNKLLETLEEFVRDRAKRPKSPERKEEVPPVEKVEEEPAPDMNEIKALPPPENYIPPPPPEPEPKPQPQVTEDLVNLRDDAVTADDQGNKLALALFAGAPANNVNGSWEAFPSNGQPEVTSAWQTPAAEPGKADWELALVETASNLSKQKATLGGGFDPLLLTGMYDQGMVRQHVSTTQLSGGSASSVALPGPGKTTTPVLALPAPDGSVQPVNQDPFAASLSVPPPSYVQMADMEKKQHLLVQEQQVWHQYARDGMQGQSSLAKLNGAGYYAGGPMPMMPYGMPPVNGMGPPTGYYHTPY* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0568 652 SUPERFAMILY GAT-like domain 235 365 - -
Gso4g0568 652 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 629 IPR045192 GO:0048268|GO:0072583
Gso4g0568 652 CDD ANTH_N_AP180_plant 33 152 - -
Gso4g0568 652 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Gso4g0568 652 Gene3D - 2 156 IPR008942 -
Gso4g0568 652 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Gso4g0568 652 MobiDBLite consensus disorder prediction 366 393 - -
Gso4g0568 652 SMART enth_2 30 160 IPR013809 -
Gso4g0568 652 MobiDBLite consensus disorder prediction 366 421 - -
Gso4g0568 652 PANTHER ENTH/ANTH/VHS SUPERFAMILY PROTEIN-RELATED 1 629 - -
Gso4g0568 652 Pfam ANTH domain 32 152 IPR011417 GO:0005543
Gso4g0568 652 Pfam ANTH domain 216 365 IPR011417 GO:0005543
Gso4g0568 652 Gene3D ANTH domain 228 378 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Gso4g0568 652 MobiDBLite consensus disorder prediction 401 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0568 Gso-Chr4 5501415 5504102 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0568 - - gmx:100803282 1137.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0568 4 5501415 5504102 Gso6g0565 6 5234388 5237122 GST