Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0563 ATGCCTCTGAAGCCATCGTATTCGTCGGAGAATCTGATGCTTCCGGTGTCGGATCCTCCGAACGACGAAGACCGAGAGTGGCTTTTGAAAGCCGATAATTACAAGACCTTCCAAACACGAAGGATTTATGCTGCCATCTCTTATATGTCATGTGCAGTGCTCTTGGTGCTGTTCAATAAAGCCGCTCTTTCGTCTTATCACTTCCCATCTGCAAGCGTCATCACGCTTCTTCAGATGGTATGCTCATGTTGTTTTCTTTATGTATTGAGGCGCTGGAGGATAATTTCTTTCATAGCAGGCGAATCAGTAATTATGTCAGATAACTCAAAAGGATTTGTGCCACTGAAGACTTTGAAGCATACCCTTCCTCTGGCAGGAGCATATTTACTTTACATGCTAGTTACCATGGAGTCTGTTCGTGGAGTAAATGTTCCTATGTACACCACCCTTAGGAGGACCACGGTGGTATTTACAATGCTTGTAGAATATATGCTGGTGGGGCAGAGGTACTCACCTTCTGTCATTTTCAGTGTTGGCTTGATTGTCTTCGGTGCATTTGTTGCGGGAGCACGGGATTTATCCTTTGATGCCCATGGCTATGCCATTGTTTTCCTGTCAAACATCACCACAGCTATATATCTTGCAACCATAGCCCGTGTTGGCAAAACTAGTGGCCTTAATAGCTTTGGCCTTATGTGGTGCAATGGTGTCACATGTGGGCCCTTTTTGTTTATCTGGACATTAGTTCGGGGTGACGTGAAGATGACAATCAATTCTCCTTACCTTCTTTCACCTGGTTTTATTGTTGTTTTGCTTTTTTCCTGCATCCTTGCTTTCTTCCTGAATTACAGTATTTTTCTGAACACAACTCTCAATTCAGCTCTGGCACAGACAATATGTGGTAATCTTAAGGATCTATTTACTATTGGCTTTGGCTGGATAATTTTTGGTGGGCTACCATTTGATTTTTGGAATGTAGTAGGACAACTTCTGGGTTTTGCGGGCTCTGGTTTATATGCCTACTATAAGCTCATCGGCAGATAA 1044 0.432 MPLKPSYSSENLMLPVSDPPNDEDREWLLKADNYKTFQTRRIYAAISYMSCAVLLVLFNKAALSSYHFPSASVITLLQMVCSCCFLYVLRRWRIISFIAGESVIMSDNSKGFVPLKTLKHTLPLAGAYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEYMLVGQRYSPSVIFSVGLIVFGAFVAGARDLSFDAHGYAIVFLSNITTAIYLATIARVGKTSGLNSFGLMWCNGVTCGPFLFIWTLVRGDVKMTINSPYLLSPGFIVVLLFSCILAFFLNYSIFLNTTLNSALAQTICGNLKDLFTIGFGWIIFGGLPFDFWNVVGQLLGFAGSGLYAYYKLIGR* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0563 347 PANTHER UDP-SUGAR TRANSPORTER-LIKE PROTEIN 33 346 - -
Gso6g0563 347 PANTHER SOLUTE CARRIER FAMILY 35 33 346 - -
Gso6g0563 347 Pfam Triose-phosphate Transporter family 51 339 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0563 Gso-Chr6 5212815 5222317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0563 35 284 Organic Solute Cotransporters AT2G13650 23.346 2.12e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0563 K15281 - gmx:100778544 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1002 14 14499089 14506625 Gso6g0563 6 5212815 5222317 PCT
Gso17g1796 17 35179542 35184900 Gso6g0563 6 5212815 5222317 PCT
Gso6g0563 6 5212815 5222317 Gso14g1002 14 14499089 14506625 PCT
Gso6g0563 6 5212815 5222317 Gso17g1796 17 35179542 35184900 PCT