Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1796 ATGTCTCTGAAACCGTCGAATTCGTCGGAGAATCTGATGCTCCCGGTGTCTGATCCTCCCAAGAGCCACGACGCTGACGACAAGCTCTTCAAAGGCTCCGCCATGACCAAACGCGGAGCCTTCGCCGCCGTCTCCTACATGTCCTGCGCCGTTTTGTTGGTGATGTTCAATAAAGCAGCGCTTTCGTCTTATAACTTTCCGTCCGCTAACGTCATCACACTTCTTCAGATGGTATGTTCGTGCTGCTTTCTCTATTTATTGAGATGCTGGAGGATGATTTCTTTCTCAACAGGTGAATCCTTACACATATCAGATAACTCGACAAAATTTGTATCATTGAAGACTTTGAAGCACACTCTTCCTCTGTCAGGAGCTTATTTATTTTACATGCTAGTCACCATGGAGTCTGTTCGTGGAGTAAATGTTCCAATGTACACAACTCTTAGGAGGACCACAGTGGTATTTACAATGCTTGTAGAGTTTGTTCTGGTGGGGCAGAGATATACACCTTCTGTTATTTTCAGTGTTGGCTTGATTGTCTTTGGTGCGTTTGTTGCTGGAGCACGGGATTTATCTTTTGATGCTTATGGCTATGCTGTTGTTTTCATGTCGAACATCGCCACAGCAATATATCTTGCAACCATAGCCCGCATTGGGAAAACTAGTGGTCTTAATAGCTTTGGCCTAATGTGGTGCAATGGTATTATATGTGGGCCTGTTTTGCTCATCTGGACATTTGTTCGTGGTGACTTGATGACAACAATCAATTTTCCGTACCTCTTCTCACCTGGTTTTATCGTTATTTTGCTTTTTTCCTGCGTGCTGGCATTCTTCTTGAATTACTGTATTTTTCTGAACACAACACTAAATTCAGCTGTGACACAGACAATTTGTGGTAATCTGAAGGATCTATTTACTATTGGCCTTGGCTGGATAATTTTTGGTGGGCTACCATTTGATTTTTGGAATATAATTGGGCAATTTCTCGGTTTTGCCGGATCTGGCTTATACGCCTACTACAAGCTCATTGGCAAGTAA 1038 0.4297 MSLKPSNSSENLMLPVSDPPKSHDADDKLFKGSAMTKRGAFAAVSYMSCAVLLVMFNKAALSSYNFPSANVITLLQMVCSCCFLYLLRCWRMISFSTGESLHISDNSTKFVSLKTLKHTLPLSGAYLFYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEFVLVGQRYTPSVIFSVGLIVFGAFVAGARDLSFDAYGYAVVFMSNIATAIYLATIARIGKTSGLNSFGLMWCNGIICGPVLLIWTFVRGDLMTTINFPYLFSPGFIVILLFSCVLAFFLNYCIFLNTTLNSAVTQTICGNLKDLFTIGLGWIIFGGLPFDFWNIIGQFLGFAGSGLYAYYKLIGK* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1796 345 PANTHER BNAA08G30680D PROTEIN 22 345 - -
Gso17g1796 345 MobiDBLite consensus disorder prediction 1 25 - -
Gso17g1796 345 Pfam Triose-phosphate Transporter family 49 337 IPR004853 -
Gso17g1796 345 PANTHER SOLUTE CARRIER FAMILY 35 22 345 - -
Gso17g1796 345 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1796 Gso-Chr17 35179542 35184900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1796 37 281 Organic Solute Cotransporters AT2G13650 24.803 1.52e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1796 K15281 - gmx:100819763 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1002 14 14499089 14506625 Gso17g1796 17 35179542 35184900 GST
Gso17g1796 17 35179542 35184900 Gso6g0563 6 5212815 5222317 PCT
Gso6g0563 6 5212815 5222317 Gso17g1796 17 35179542 35184900 PCT