Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0558 ATGCAGAGACGAAGTCCTCCGAAGCACAGGCACGATGGGACTTCGCCGCTGCCTCTCGGCATGGATTGGAGCCCTGCGCCTCGAAAATTGAATGGGCGAGATACAGTGTGGCCACACAATCATCGTACTGGTTGGAGTTATTGTGTCACAATACCTTCTTGGGCCTTTGTTCCAAAATCAAGGAATTCAGATCCTATAGTGTTCTACAGGGTTCAAGTTGGTGTACAGTCACCGGAAGGAATTACAAAGGTCCATGGAGTCTTAAGAAGGTTCAATGATTTTCTAAAGTTGTTTGCTGATATTAAAAAGGAGTTTCCCAGGAAAAATATCCCTCCAGCGCCACCCAAGGGACTCTTGCGGTTGAAAAGCCGAGCTTTGTTAGAAGAGAGAAGGTGCTCTTTGGAGGAGTGGATCGCCAAACTATTGTCTGACATTGATATATCAAGATGTACTGCAGTGGCGTCATTTCTCGAACTAGAAGCAGCTGCTAGATCTTCATTCCAAGATGCAAACCAGCAGAATTCTGAAACAGACCCAGATTCCAGCAACACAGTTTATTCTGTGCAATCACCTCTCCAGTCGAGCTTATCATTAGTTGCTGGCAGTTCCTCTGTTGCCTCAGATTATGGTAGTGATACTGCATATGAGCCATCTGACCTAGGAACACCAAGAATTGGACGGGACGATAATTCTGAAGTTGGCACAGATGATTTAACATTAGATGAAGATATGACGAATCCAATAGAAAAGCTTGTGAAATATGGCATAACAAATATTGACGAAGGTTTGTTTATGGGTCAGACTATTCTAGAGCAATTGGAAGGCCTTCCTAGGCATAAAGCAAATGCCAGATATGTGAACTATGTTGCAGAAAAGGACAAAAATAATGGTAATTTATATGATTCTTCACTTTTAGCTAATAATAACATGGAGCTTTTCTCTGAGCCTGGGCATGCTAAGGTGTTTGGTCATGTTCGTAAGCTTTCAAATGAGAGTGTTGAAAGCGATGGAAGCTCAATACGAGGTAGTGACATGTCTAATTTTGGGATTCCAAGTTCATCTGGTGATGGCTCTCATGACCTTCCTGGATCTGCTTTGGTTTCAAGAGAGACAGATATTATGGGCCACACAAAGTCGAAGTCTACTGGTGATACTCAATTAGTCCTTCCACTAGATCAACGCAATAAATTGAACAGGATTCTTTCAACCATGCAGCGAAGGCTAGGCACTGCAAAAACTGATATGGAGGACCTTATAGTTAGATTAAATCAAGAAATAGCTGCAAAGGATTTTCTCGCAACAAAGCTCAAGGATTTGGAAGTAGAACTTGAAACTACCAAACAGAAAAATAAGGAGAACTTGCAGCAGGCTATTCTAATTGAGAGAGAAAGGTTTACCCAAATGCAGTGGGATATGGAGGAACTTAGAAGAAAATCATTGGAAATGGAGATGAAATTAAAGTCTGAATCGGGGAGAAATTCTTATCAGGATTTGACTAAGGAATCAATTGTTCAGCAGAATGATGTACTGTATGAGAATTTAGATGCTACTAAGGAGCAGCTGGAAATTTTGTCAAAACAGTATGGAGAGCTAGAAGCAAAATCCAAAGCAGATGTTAAAGTTCTCGTTAAAGAGGTCAAATCTCTCCGTAATTCCCAAACAAAGTTAAAGAAAGAACTTAGTGAGTCAATAAAGGAACACAGTGAAACTGAGAAACTACTTCTGCATGAAAGAGAGAAGAGGGAACAGGCAGAAGCTGCTCGGAGAAAACTGCTGGAGAAATGCAGGGTTCTTTTCAACCAGCTTCAAGAATGCAATGTCAGTCTTCCTTATGAATACGAAGATAGGACAATCGTGAATTCATCATCATCAACTGATGCTTTTAATCAGTTAACGACATCTGATGACCAAATGGACATCCTACTAGCAGAGGTAGAAAACTTAGAGAAGGACTACGGAAGTGCGGCTTCCAATGTAGATAAAACCACCAATGACATAAAAGATGGTGTAATCTGTGATGATGAAGTGAGAAAGATCATAGCAGATTTGTTCATCGATAATGTTAGATTGAGAAAACAGACAAACCGCGTCACAAGGCAGGCTCTCAAATTGGATATGACAGCAAGTGATGATTCCCCTTCGGTGGAGACTCTAACAAGTATTTAG 2166 0.4104 MQRRSPPKHRHDGTSPLPLGMDWSPAPRKLNGRDTVWPHNHRTGWSYCVTIPSWAFVPKSRNSDPIVFYRVQVGVQSPEGITKVHGVLRRFNDFLKLFADIKKEFPRKNIPPAPPKGLLRLKSRALLEERRCSLEEWIAKLLSDIDISRCTAVASFLELEAAARSSFQDANQQNSETDPDSSNTVYSVQSPLQSSLSLVAGSSSVASDYGSDTAYEPSDLGTPRIGRDDNSEVGTDDLTLDEDMTNPIEKLVKYGITNIDEGLFMGQTILEQLEGLPRHKANARYVNYVAEKDKNNGNLYDSSLLANNNMELFSEPGHAKVFGHVRKLSNESVESDGSSIRGSDMSNFGIPSSSGDGSHDLPGSALVSRETDIMGHTKSKSTGDTQLVLPLDQRNKLNRILSTMQRRLGTAKTDMEDLIVRLNQEIAAKDFLATKLKDLEVELETTKQKNKENLQQAILIERERFTQMQWDMEELRRKSLEMEMKLKSESGRNSYQDLTKESIVQQNDVLYENLDATKEQLEILSKQYGELEAKSKADVKVLVKEVKSLRNSQTKLKKELSESIKEHSETEKLLLHEREKREQAEAARRKLLEKCRVLFNQLQECNVSLPYEYEDRTIVNSSSSTDAFNQLTTSDDQMDILLAEVENLEKDYGSAASNVDKTTNDIKDGVICDDEVRKIIADLFIDNVRLRKQTNRVTRQALKLDMTASDDSPSVETLTSI* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0558 721 Coils Coil 539 566 - -
Gso6g0558 721 Coils Coil 507 534 - -
Gso6g0558 721 SUPERFAMILY PX domain 40 160 IPR036871 GO:0035091
Gso6g0558 721 MobiDBLite consensus disorder prediction 1 25 - -
Gso6g0558 721 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
Gso6g0558 721 MobiDBLite consensus disorder prediction 333 359 - -
Gso6g0558 721 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 713 IPR044588 GO:0015031
Gso6g0558 721 MobiDBLite consensus disorder prediction 168 187 - -
Gso6g0558 721 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 713 - -
Gso6g0558 721 Coils Coil 631 665 - -
Gso6g0558 721 Gene3D - 46 187 IPR036871 GO:0035091
Gso6g0558 721 MobiDBLite consensus disorder prediction 333 360 - -
Gso6g0558 721 MobiDBLite consensus disorder prediction 207 240 - -
Gso6g0558 721 Pfam PX domain 86 158 IPR001683 GO:0035091
Gso6g0558 721 SMART PX_2 55 160 IPR001683 GO:0035091
Gso6g0558 721 Coils Coil 422 456 - -
Gso6g0558 721 Coils Coil 574 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0558 Gso-Chr6 5168626 5177584 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0558 - - gmx:100789039 1368.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0562 4 5435861 5444664 Gso6g0558 6 5168626 5177584 GST