Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0562 ATGCAGAGACGAAGTCCTCCGAAGCACAGGCACGACGGGACTTCGCCGCTGCCTCTCGGCATGGATTGGAGCCCTGCGCCTCGAAAATGGAATGGGCGAGATACAGTGTGGCCACACAATCATCTTACTGGTTGGAGTTATTGTGTCACAATACCTTCTTGGGCCTTTGTTCCAAAATCAAGGAATTCAGATCCTATAGTGTTCTACAGGGTTCAAGTTGGTGTACAGTCACCGGAAGGGATTACAAAGGTCCATGGAGTCTTGAGAAGGTTCAATGATTTTCTAAAGTTGTTTGCTGATATTAAAAAGGAGTTTCCCAGGAAAAATATCCCTCCAGCACCACCCAAGGGACTCTTGCGGTTGAAAAGCCGAGCTTTGTTAGAAGAGAGAAGGTGCTCTTTGGAGGAGTGGATCACCAAACTATTATCTGACATTGATATATCACGATGTGCTGCCGTGGCGTCATTTCTTGAACTAGAAGCAGCTGCTAGATCTTCATTCCAAGATGCAAGCCAGCAGAATTCTGAAACAGACCCCGATTCCAATAACACAGTTTATTCTGTGCAATCACCTCTCCAGTCGAGTTTATCATTATTCGCTGGCAGTTCATCTGTTGCCTCAGATTATGGTAGTGATACTGCATATGAGCCATCTGACCTAGGAACACCAAGAATTGGACGGGACGATAATTCTGAAGTTGGCACAGATGATCTAACATTAGATGAAGATATGACGAATCCAATAGAAAAGCTTGTGAAATATGGCATATCAAATATTGACGAAGGTTTGTTTATGGGTCAGACTATTCTAGAGCAATTGGAAGGCCTTCCTAGGCATAAAGCAAATGCCAGACATGTGAACTATGCTGCAGAAAAGGTAAAAAATAATGGTAATGTATATGATTCCTCACTTTTAGCTAATAATACCATGGAGCTTTTCTCTGAGCCTGGGCATGCTAAGGTTGTTGCTCATGTTCGTAAGCTTTCAAGTGAGAGTGTTGGAAGTGATGGAAGCTCAATACGAGGTAGTGACATGTCTAATTTTGGGATTCCAAATTCATCTGGTGATGGCTCTCATGACCTTCCTGGATCTGCTTTGGTTTCAAGAGAGACAGATATTATGGGCCACACAAAGTTGAAGTCTACTGGTGATACTCAATTAGTCCTTCCACTAGATCAACGCAATAAATTGAACAGGATTCTTTCAACCATGCAGCGAAGGCTAGGCACTGCAAAAACTGATATGGAGGACCTTATAGTTAGATTAAATCAAGAAATAGCTGCAAAGGATTTTCTTGCAACAAAGGTCAAGGATTTGGAAGTAGAACTTGAAACTACCAAACAGAAAAATAAGGAGAACTTGCAGCAGGCTATTCTAATTGAGAGAGAAAGGTTTACTCAAATGCAGTGGAATATGGAGGAACTTAGACGACAATCATTGGAAATGGAGATAAAACTAAAGTCTGAATTGGGGCGAAATTCTTATCAGGATTTGACAAAGGAATCAATTGTTCAGCAGAATGATGTACTGTTGGAGAATTTAGATGCTACTAAGGAGCAGCTGGAAATTTTGTCAAAACAGTATGGAGAGCTAGAAGCCAAATCCAAAGCAGATGTTAAAGTTCTGGTTAAAGAGGTCAAATCTCTCCGTAATTCCCAAACAAAGTTAAAGAAAGAACTTAGTGAGTCTATAAAGGAACACAGTGAAACTGAGAAACTACTTCTGCACGAAAGAGAGAAGAGGGAGCAGGCAGAAGTGGCTCGGAGAATACTGCTGGAGAAATGCAGGGTTCTTTTCAACCAGCTTCAAGAGTGCAATGTCAGTCTTCCTTACGAATACGAAGGTAGGACAATTGTGAATTCATCATCATCAACTGATGCTTTTAATCAATTAACGACATCTGATGACCAAATGGACATCCTACTAGCAGAGGTAGAAAACTTAGAGAAGGACTACGGAAGTGCAGCTTGCAATGTAGATAAAACGAATGACATAAAAGATGGTGTAATCTGTGATGATGAAGTGAGAAAGATCATAGCAGATTTGTTCATCGATAATGTTAGATTGAGAAAACAGACAAACCGCGTCACAAGGCATGCCCTCAAATTGGATATGACAGCAAGTGATGATTCCCCTTCAGTGGAAACTGTAACAAGTATTGAGAAATATATGTGA 2175 0.4115 MQRRSPPKHRHDGTSPLPLGMDWSPAPRKWNGRDTVWPHNHLTGWSYCVTIPSWAFVPKSRNSDPIVFYRVQVGVQSPEGITKVHGVLRRFNDFLKLFADIKKEFPRKNIPPAPPKGLLRLKSRALLEERRCSLEEWITKLLSDIDISRCAAVASFLELEAAARSSFQDASQQNSETDPDSNNTVYSVQSPLQSSLSLFAGSSSVASDYGSDTAYEPSDLGTPRIGRDDNSEVGTDDLTLDEDMTNPIEKLVKYGISNIDEGLFMGQTILEQLEGLPRHKANARHVNYAAEKVKNNGNVYDSSLLANNTMELFSEPGHAKVVAHVRKLSSESVGSDGSSIRGSDMSNFGIPNSSGDGSHDLPGSALVSRETDIMGHTKLKSTGDTQLVLPLDQRNKLNRILSTMQRRLGTAKTDMEDLIVRLNQEIAAKDFLATKVKDLEVELETTKQKNKENLQQAILIERERFTQMQWNMEELRRQSLEMEIKLKSELGRNSYQDLTKESIVQQNDVLLENLDATKEQLEILSKQYGELEAKSKADVKVLVKEVKSLRNSQTKLKKELSESIKEHSETEKLLLHEREKREQAEVARRILLEKCRVLFNQLQECNVSLPYEYEGRTIVNSSSSTDAFNQLTTSDDQMDILLAEVENLEKDYGSAACNVDKTNDIKDGVICDDEVRKIIADLFIDNVRLRKQTNRVTRHALKLDMTASDDSPSVETVTSIEKYM* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0562 724 Coils Coil 539 566 - -
Gso4g0562 724 Pfam PX domain 86 158 IPR001683 GO:0035091
Gso4g0562 724 MobiDBLite consensus disorder prediction 168 187 - -
Gso4g0562 724 MobiDBLite consensus disorder prediction 209 239 - -
Gso4g0562 724 Coils Coil 429 456 - -
Gso4g0562 724 SMART PX_2 55 160 IPR001683 GO:0035091
Gso4g0562 724 MobiDBLite consensus disorder prediction 1 24 - -
Gso4g0562 724 Coils Coil 500 534 - -
Gso4g0562 724 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
Gso4g0562 724 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 713 IPR044588 GO:0015031
Gso4g0562 724 Gene3D - 47 186 IPR036871 GO:0035091
Gso4g0562 724 Coils Coil 631 651 - -
Gso4g0562 724 SUPERFAMILY PX domain 43 160 IPR036871 GO:0035091
Gso4g0562 724 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0562 Gso-Chr4 5435861 5444664 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0562 - - gmx:100792151 1388.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0562 4 5435861 5444664 Gso6g0558 6 5168626 5177584 GST