Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0555 ATGTATAAGATTTGTCGTCGCCGTTTGTTTCTATTCCAATTTGTGTTGCTCTTTCTGTGGTTGATCCTCATTGAATGGCTACACCCATGGCAGTTCATCAGATTCACCGAATCGAATCCGGAATATTCCGTTTCTCTTCATCAACTTCGAAGACACCTTTTCGGCCAGAATCAACTTCGTGCTGATGGAGACGCCGCCGCCGCCGCTCACTCAAATAATACCACCGTAACCAGGGATGTGGTAAGAGTGAATATCAGAGAAGAAAAGCGAGAAGAAGGACTCGCACGAGCAAGAGCTGCGATGCGCATAGCGGCATTAACTGGAACAAATCTCACAACACACGATAACGACGACATTCTCGCTGGAACTGTTTATCGTAACCCTCGCTTATTTCACCAGAGCTACTTGGAGATGGAGAAGTTATTCAAGGTATACGTATACCCTGATGGGGACCTACCAATTGTTCACGATGCCCCCTGCAAGGACATATACTCGATTGAAGGGAGGTTCCTCCACGAGATGGAACATGGGGTTGGGAGGTTTAGGACTAACGACCCCACTGCAGCTCACGTTTACTTTCTTCCATTCAGCGTGACATGGATGGTCAAGTACTTCTATAGTACACCACACTCTTACGACGTCACTCCTTTAAAGAATTTTGTTTCTGACTACGTGAGAGTGATATCTACGAAGTATCCCTTCTGGAATAAAACTCATGGTGCTGATCACTTCATGGTTGCTTGTCATGATTGGGGTCCTTATGCATCAGAGGGAAACCCTTTCCTCTACAACACCTCCATCCGGGTCTTGTGCAATGCCAACACTTCTGAAGGCTTCAACCCTCAAAAGGATGTACCTCTGCCGGAAATCCACCTCTATGGAGGTGAAGTATCCCCTAAACTCCTTTCACCTCCACCGGGCAACGCCACGCGCCGCTATCTCGCCTTCTTTGCCGGTGGCATGCACGGCCCAATTCGCCCTATCCTGCTCCACCACTGGAATAACCGAGACATTAATGACGACATGCGTGTGTACGAGTATCTCCCCAAAGACCTAGACTATTATTCCTTCATGCTGAACTCCAAGTTCTGCCTTTGCCCAAGTGGGTACGAAGTGGCTAGCCCGAGAATCGTGGAGTCAATTTATGCCGAATGCGTGCCCGTGATCCTATCAAAGAATTATACGCTTCCCTTCAGTGATGTACTGCGATGGGAGTCATTTTCAGTGCAGGTGGATGTTTCAGATATTCCAAGGCTGAAAGAGGTGCTTAGTGCAATTCCAGAGAGCGAGTACCAGAAACTCAAGCATGGAGTAAGGGCTGTGAGGAGACATTTTACTCTGAATCAACCGGCTAAGAGACTTGATGTCTTTCACATGATCTTGCATTCCATATGGCTCAGAAGATTAGATATAGATCTTAGATAA 1425 0.4716 MYKICRRRLFLFQFVLLFLWLILIEWLHPWQFIRFTESNPEYSVSLHQLRRHLFGQNQLRADGDAAAAAHSNNTTVTRDVVRVNIREEKREEGLARARAAMRIAALTGTNLTTHDNDDILAGTVYRNPRLFHQSYLEMEKLFKVYVYPDGDLPIVHDAPCKDIYSIEGRFLHEMEHGVGRFRTNDPTAAHVYFLPFSVTWMVKYFYSTPHSYDVTPLKNFVSDYVRVISTKYPFWNKTHGADHFMVACHDWGPYASEGNPFLYNTSIRVLCNANTSEGFNPQKDVPLPEIHLYGGEVSPKLLSPPPGNATRRYLAFFAGGMHGPIRPILLHHWNNRDINDDMRVYEYLPKDLDYYSFMLNSKFCLCPSGYEVASPRIVESIYAECVPVILSKNYTLPFSDVLRWESFSVQVDVSDIPRLKEVLSAIPESEYQKLKHGVRAVRRHFTLNQPAKRLDVFHMILHSIWLRRLDIDLR* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0555 474 Pfam Exostosin family 139 425 IPR040911 -
Gso6g0555 474 PANTHER XYLOGALACTURONAN BETA-1,3-XYLOSYLTRANSFERASE 64 471 - -
Gso6g0555 474 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 64 471 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0555 Gso-Chr6 5145278 5148420 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0555 - - gmx:102659997 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0988 14 13968272 13975049 Gso6g0555 6 5145278 5148420 PCT
Gso17g1803 17 35386449 35393885 Gso6g0555 6 5145278 5148420 PCT
Gso6g0555 6 5145278 5148420 Gso14g0988 14 13968272 13975049 PCT
Gso6g0555 6 5145278 5148420 Gso17g1803 17 35386449 35393885 PCT