Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1803 ATGGAGATTCCACGTAAATATCTCCTCTCTCCAATTTTGTCGCTGATTCTACTTTCGTTCATCATCGTCGTGGTGCTGCGTCCATGTCAGTTACTCGAATTCGCGCCAATTATTGCCGGTTCAAAACCTGCGTATTCCGTTCCTCTGGATAGTCTCCGAACGAAGCTCTCCAGTGAGAATCAACTCCACGCCGTCGGAAACTCCGGCGAACTTCGCCGGAACAAGTTCCGCAACCGAACAGCTACCAGGAAGGTAGGAAAACTCGAACAAAGACTCGCGGCAGCGAGAGCTGCGATGCGGAAGGTTGCGTCGGAATCAGAAGGTGAGAGAAGCAATCTTAGTGTGGCAACCACCGCGCGTGATGACAGCTACCACCGCTACGTTCCCGCCGGAGCTATCTATCGTAACGCCCGCTTGTTTTATCGGAGCTACTTGGAGATGGAGAAAATATTCAAGGTGTACGTATACCCAGACGGTGACCTACCAATCGCTCACGATGGCCCGTGCAAGGACATATACTCCATTGAAGGGAGGTTCCTCCATGAGATGGAACACGGTGCTGGAAGGTTTAGGACCAACGACCCCAACGCTGCTCACGTTTTCTTCTTGCCATTCAGTGTCACTTGGATGGTCAAGTACCTTTATACTCCACTCTCATTCAACGTCACCCCTTTAAAGAAGTTTGTCTCTGACTATGTAAGAGTCGTTTCTACAAGGCACCCCTTCTGGAATATAACTCATGGTGCCGACCACTTCATGCTTGCCTGTCATGATTGGGGTCCTCATGCATCACAGGGCAACCCCTTCCTCTACAACACCTCAATCCGTGTCTTGTGCAACGCCAACACTTCAGAGGGCTTCAACCCTCGAAAAGACGTATCCTTACCAGAAATCCACCTCTACGGAGGTGAAGTGTCCCCCAAGCTCCTCTCACCACCACCGGACACTGCCCCCCGCCGCTACCTCGCCTTCTTCTCCGGTGGTTTGCATGGTCCAATCCGCCCCGCCCTCCTCGGCCACTGGAAAAACCACGACGAAAACGACGTCATTCGTGTCTACGAGTACCTCCCCAAAGACCTAGACTATTACTCCTTCATGCTCACCTCCAAGTTCTGTCTCTGTCCAAGTGGGCACGAAGTGGCTAGCCCCAGAATCGTGGAGGCAATCTACGCCGAATGCGTGCCCGTGATCCTGTCTGAGTACTATGTGTTGCCCTTCAGTGATGTGCTGCAATGGGAGGCATTTTCAGTGCAGGTGGATGTTTCGGATATTCCTAGGTTGAAAGAGATTCTTAGTGCAATTTCGGAAGATAAGTATAGGAAGCTCAAGGAAGGAGTGAAGGCTGTGAGGAGACATTTTACACTGAATCGCCCTGCCAAGAGATTTGATGTATTTCACATGATCTTGCACTCTATATGGTTAAGGAGACTAAACATAGAACTCAGATAG 1449 0.5066 MEIPRKYLLSPILSLILLSFIIVVVLRPCQLLEFAPIIAGSKPAYSVPLDSLRTKLSSENQLHAVGNSGELRRNKFRNRTATRKVGKLEQRLAAARAAMRKVASESEGERSNLSVATTARDDSYHRYVPAGAIYRNARLFYRSYLEMEKIFKVYVYPDGDLPIAHDGPCKDIYSIEGRFLHEMEHGAGRFRTNDPNAAHVFFLPFSVTWMVKYLYTPLSFNVTPLKKFVSDYVRVVSTRHPFWNITHGADHFMLACHDWGPHASQGNPFLYNTSIRVLCNANTSEGFNPRKDVSLPEIHLYGGEVSPKLLSPPPDTAPRRYLAFFSGGLHGPIRPALLGHWKNHDENDVIRVYEYLPKDLDYYSFMLTSKFCLCPSGHEVASPRIVEAIYAECVPVILSEYYVLPFSDVLQWEAFSVQVDVSDIPRLKEILSAISEDKYRKLKEGVKAVRRHFTLNRPAKRFDVFHMILHSIWLRRLNIELR* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1803 482 Pfam Exostosin family 149 433 IPR040911 -
Gso17g1803 482 PANTHER EXOSTOSIN FAMILY PROTEIN 65 480 - -
Gso17g1803 482 Coils Coil 78 105 - -
Gso17g1803 482 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 237 462 - -
Gso17g1803 482 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 65 480 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1803 Gso-Chr17 35386449 35393885 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1803 - - gmx:100794890 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0988 14 13968272 13975049 Gso17g1803 17 35386449 35393885 GST
Gso17g1803 17 35386449 35393885 Gso6g0555 6 5145278 5148420 PCT
Gso6g0555 6 5145278 5148420 Gso17g1803 17 35386449 35393885 PCT