Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0553 ATGGGTTGGAGATACAACGCTGGATTGTTCCTCATAGTCACTGTTGTTATTATTTGGGTCACCTCCGCCGAAGTTACCCAGGATATTTTTACAGATTATAAGCAGCCATTTGCAGTAACATATCTTGGAGCTTCTCTTATGGTAGTTTACCTCCCAATAGCATTCATTAAGGACTGGTTCTGTAACTTGCTTAAATCCCGCTCCTCTAAAAGTGGTAAAAATGCAGAATGCGTGGATGAGTTTTCTGTCAGGATTAGCTCTCCTCTCAAAAGCAATGGAGTGCAGAAAAACTTTGAACTGGAATTGGGGAGTGTGAATCGAAAAGATAGTGATTTAGACCTTTCAACACTTGCAGAAGTAAAGCCATTAGTAGCTAAATATAATGATAATACTAATGTGCTAAAGGTGGAGAGACAACTTAATGGGAAGGAAATTGCTGCTTATGGATTTTACATTGCACCTATCTGGTTTATAACAGAGTATCTATCAAATGCAGCCCTTGCACGAACAAGTGTTGCAAGTACAACAGTATTATCATCAACTTCAGGACTTTTCACTCTTTTCATTGGTGCATTTATGGGTCAAGACTCTTTAAATGTAGCAAAAGTAGTTGCTGTCTTAGTCAGCATGGCTGGGGTTGTCATGACAACGCTGGGGAAAACTTGGGCTGCAGATGAATCACAATTAAGTGATGCTGGAAAGCACTCTTTAGTTGGAGATCTTTTTGGAATTCTCTCAGCTATGTCATACGGTCTATTTACAGTTCTTCTTAAGAAGTTTTCTGGTGAAGAAGGAGAAAGGGTTGATGTGCAAAAGCTGTTTGGGTATATTGGATTGTTTACACTTGTAGCACTCTGGTGGCTCGTCTGGCCATTGATGGCCTTAGGAATTGAACCCAAATTTACCATTCCCCACTCTGCTAAAGTGGATGAAGTGGTTCTTGCAAATGGATTTATTGGAAGCGTACTTTCAGACTACTTCTGGGCACTTTGCGTTGTATGGACTACTCCTCTTGTGGCCACTTTGGGCATGTCACTCACCATTCCTCTTGCTATGGTGGCTGACATGGTAATTCATGGTCGGCATTATTCGGCAGTATACATTCTTGGCTCAGTTCAGGTATTTGCAGGCTTTGTAATAGCTAATCTTTCAGATCGGTTGACGAAGATGTTGGGATTGTAG 1182 0.4103 MGWRYNAGLFLIVTVVIIWVTSAEVTQDIFTDYKQPFAVTYLGASLMVVYLPIAFIKDWFCNLLKSRSSKSGKNAECVDEFSVRISSPLKSNGVQKNFELELGSVNRKDSDLDLSTLAEVKPLVAKYNDNTNVLKVERQLNGKEIAAYGFYIAPIWFITEYLSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDSLNVAKVVAVLVSMAGVVMTTLGKTWAADESQLSDAGKHSLVGDLFGILSAMSYGLFTVLLKKFSGEEGERVDVQKLFGYIGLFTLVALWWLVWPLMALGIEPKFTIPHSAKVDEVVLANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAVYILGSVQVFAGFVIANLSDRLTKMLGL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0553 393 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 1 392 - -
Gso6g0553 393 PANTHER OSJNBA0070O11.5 PROTEIN 1 392 - -
Gso6g0553 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 279 386 - -
Gso6g0553 393 Pfam EamA-like transporter family 138 217 IPR000620 GO:0016020|GO:0016021
Gso6g0553 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 138 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0553 Gso-Chr6 5126630 5132485 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0553 K15289 - gmx:100792013 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0558 4 5391542 5396790 Gso6g0553 6 5126630 5132485 GST
Gso14g0986 14 13939800 13944607 Gso6g0553 6 5126630 5132485 PCT
Gso17g1804 17 35420875 35425995 Gso6g0553 6 5126630 5132485 PCT
Gso6g0553 6 5126630 5132485 Gso14g0986 14 13939800 13944607 PCT
Gso6g0553 6 5126630 5132485 Gso17g1804 17 35420875 35425995 PCT