Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1804 ATGGGGTGGAGATACAAGGCAGGGTTGTTCCTTATACTTACTGTGGTTGTCATATGGGTCACCTCTGCTGAAGTCACCCAGGATATTTTTGTAGATTACAAGCAGCCATTTGCAGTGACGTATCTTGGAGCTTCTCTTATGGTAGTTTACCTCCCAGTAGCATTCATTAAGGACTGGTTGTGTAAGTTATTTGAACACCGCTCTTCTAGAAGTGGAAAAAGTGCAAAAGTTGGGGATGAGTTTTCTGTCAGGTGTACCTCTCCTCTGAAGGGCAATGGAGTGCAAAAAAACATTGAAGTAGAATTGGGGGGCATGACTCGAAAAGATAGTGATGCAAACCTTTCAGCACATGAAGAAGTAAAGCCATTGATGGCTAAATATAATGATGCTACTGCTATAAAGGTCGAGAAAGAACATACTACAAGGGAAATTGCTACTTATGGATTTTACATTGCACCTATCTGGTTTATAACAGAGTATCTATCAAATGCTGCCCTTGCGCGAACAAGTGTTGCAAGTACAACAGTATTATCATCTACTTCAGGACTCTTCACTCTCTTCATTGGTGTGCTTATGGGCCAGGACACTTTAAATGTATCAAAAGTAGTTGCTGTCTTGGTCAGCATAGCCGGGGTTGTGATGACAACTCTGGGGAAAACATGGGCTGCAGATGACGCGATATCAAGTGCTTCCAATGGACAACGCTCTCTTGTTGGAGATCTTTTTGGCCTTCTCTCTGCCATGTCATATGGTCTATTTACAGTGCTTCTCAAAAAAATTTCTGGTGAAGAAGGAGAACGAGTTGATGTGCAAAAGTTGTTTGGATATGTTGGATTGTTTACACTTGTAGCACTATGGTGGCTTATTTGGCCATTGTCAGCCTTAGGAATTGAACCGAAGTTTACAATTCCCCATTCAGCCAGAGTGGACGAAGTGGTTCTTGCCAACGGATTTGTTGGTAGTGTTCTCTCAGACTACTTCTGGGCACTTTGTGTTGTATGGACAACTCCCCTTGTGGCCACTTTGGGCATGTCACTTACCATTCCTCTTGCTATGATGGCTGACATGGTGATCCATGGTCGGCATTATTCGGCATTGTACATTCTTGGCTCAATCCAGGTATTTGCAGGCTTTGTGATAGCTAATATTTCAGATAGGCCAACCAAGAAGCAGGGATTATAG 1182 0.4289 MGWRYKAGLFLILTVVVIWVTSAEVTQDIFVDYKQPFAVTYLGASLMVVYLPVAFIKDWLCKLFEHRSSRSGKSAKVGDEFSVRCTSPLKGNGVQKNIEVELGGMTRKDSDANLSAHEEVKPLMAKYNDATAIKVEKEHTTREIATYGFYIAPIWFITEYLSNAALARTSVASTTVLSSTSGLFTLFIGVLMGQDTLNVSKVVAVLVSIAGVVMTTLGKTWAADDAISSASNGQRSLVGDLFGLLSAMSYGLFTVLLKKISGEEGERVDVQKLFGYVGLFTLVALWWLIWPLSALGIEPKFTIPHSARVDEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMMADMVIHGRHYSALYILGSIQVFAGFVIANISDRPTKKQGL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1804 393 Pfam EamA-like transporter family 139 216 IPR000620 GO:0016020|GO:0016021
Gso17g1804 393 PANTHER OSJNBA0070O11.5 PROTEIN 1 392 - -
Gso17g1804 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 279 387 - -
Gso17g1804 393 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 1 392 - -
Gso17g1804 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 140 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1804 Gso-Chr17 35420875 35425995 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1804 K15289 - gmx:100776833 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0986 14 13939800 13944607 Gso17g1804 17 35420875 35425995 GST
Gso17g1804 17 35420875 35425995 Gso4g0558 4 5391542 5396790 PCT
Gso17g1804 17 35420875 35425995 Gso6g0553 6 5126630 5132485 PCT
Gso4g0558 4 5391542 5396790 Gso17g1804 17 35420875 35425995 PCT
Gso6g0553 6 5126630 5132485 Gso17g1804 17 35420875 35425995 PCT