Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0501 ATGGCGTTGGTGAATCCGTTTCTGTCTCCCCCTCGAACTCCCCTCTCTCTGCGAGTTTCAGCTCCGCCAAACCAAGCACTACTACGTTGGACTCTCTGCTCCCAATATTCATTCAAACCATCATCACTAAGATCGAAGCACGCCATGTGTGGCGCCACTGCCGACATCAAGGCTGCACCTTTAGCTGATGGAGAAGCAGATCACGCGGTTCTTGTGGGCCCCGCCAGCGAGGACGAGAGAAAAGGAGACTATGACTGGACACAGGAATGGTACCCTTTGTATCTCACTCTGAATGTGCCCGAAGATGCACCTTTGGGTCTTAGAGTGTTTGATAAACAGCTCGTCTTGTTCAAAGATGGCAATGGCCAGTTTCGCTGTTACGAAGATCGCTGCCCCCACAGGTTAGCAAAATTATCCGAGGGGCAGTTGATTGATGGAAGGCTTGAGTGTTTGTACCATGGATGGCAATTTGAAGGGGAGGGCAAATGTGTGAAGATACCCCAGCTTCCAGCTGATGCCAAAATCCCTCAGGCAGCTTGTGTTAAAACATATGAAGTGAGGGACTCTCAAGGTGTTATTTGGGTGTGGATGTCCCTCAAGACACCTCCAAATGTTAGTAAACTACCTTGGTTTGAGAACTTCGCAAGGCCGGAGTTTCAAGATATTTCGACAATTCATGAACTCCCTTATGATCACTCTATTCTTCTGGAGAACCTGATGGATCCTGCTCATATCCCAATCTCACATGACAGAACAGATTGGACTGCAAAAAGGGAGGATGCTCAGCCGCTGAGTTTTGAGGTGACCGAACGAACCCATAGAGGGTTTGCAGGTTGGTGGGGCAGAGAGAAAGACGGATCCATGCCTAACTTCTTGCGGTTTGAGGCTCCTTGTGTTCTACAAAACAACAGGGAAATTGTTGATAAGAATGGTGAAATAAACTACTTCAGTGGTCTGTTCCTTTGCAGACCAACCGGGCAAGGGAAATCCATGCTAATAGTGAGATTTGGAGGAACAAAAAGATCACCACTAGCAAAAGTGTTTCCTAAGTGGTACCTCCACCAGAATGCAAGCAAGGTGTTTGAGCAAGACATGGGATTCTTGTCATCACAAAATGAAATTCTTCTGAAAGAAAAGGTTTCAACAAAGGAACTATACCTGAATCTGAAATCATCAGACACATGGGTTGCTGAATACAGGAAGTGGATGGACAAAGCGGGGCATGGAATGCCATATCATTTTGGTCACAGCACTATCTCTTTGCCTAAAGAGCCTGCTGTGGTTGAACATGCTCCTGCGGGACTCGTCGCGGGACAATCAGCTTCTTCACCTACCAAGGGGGGCATTGGTACAATGCATGCCCCAAATTTCGCCAACAGATATTTTAGGCATGTGATTCATTGCAAAGGATGTAGAACCGTTGTCAAAGCTTTCGAAGCTTGGAAAAATGCCCTTTCAGCTGTGGCAGTTGCATTAGTTGCTCTGGCAATTCTGGTATCTGGGAGACAATGGAAAGCCCTTCTCTTGGCATCTGCAGCTCTGTGCTCCGTTGGAGTCTATGCTTGCTCAATCGCCATTGCGATGAATACAACAAATTTTATTAGGACACATAGGAGATTGTGA 1623 0.4689 MALVNPFLSPPRTPLSLRVSAPPNQALLRWTLCSQYSFKPSSLRSKHAMCGATADIKAAPLADGEADHAVLVGPASEDERKGDYDWTQEWYPLYLTLNVPEDAPLGLRVFDKQLVLFKDGNGQFRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPQAACVKTYEVRDSQGVIWVWMSLKTPPNVSKLPWFENFARPEFQDISTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLSFEVTERTHRGFAGWWGREKDGSMPNFLRFEAPCVLQNNREIVDKNGEINYFSGLFLCRPTGQGKSMLIVRFGGTKRSPLAKVFPKWYLHQNASKVFEQDMGFLSSQNEILLKEKVSTKELYLNLKSSDTWVAEYRKWMDKAGHGMPYHFGHSTISLPKEPAVVEHAPAGLVAGQSASSPTKGGIGTMHAPNFANRYFRHVIHCKGCRTVVKAFEAWKNALSAVAVALVALAILVSGRQWKALLLASAALCSVGVYACSIAIAMNTTNFIRTHRRL* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0501 540 Gene3D - 85 213 IPR036922 GO:0051537
Gso6g0501 540 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 76 540 - -
Gso6g0501 540 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 90 195 IPR017941 GO:0051537
Gso6g0501 540 Pfam Rieske [2Fe-2S] domain 89 171 IPR017941 GO:0051537
Gso6g0501 540 SUPERFAMILY Bet v1-like 191 409 - -
Gso6g0501 540 Pfam Pheophorbide a oxygenase 294 379 IPR013626 GO:0010277
Gso6g0501 540 SUPERFAMILY ISP domain 81 203 IPR036922 GO:0051537
Gso6g0501 540 Gene3D - 217 408 - -
Gso6g0501 540 PANTHER PROTEIN TIC 55, CHLOROPLASTIC 76 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0501 Gso-Chr6 4625686 4628519 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0501 - - gmx:100818625 1110.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0509 4 4875544 4878180 Gso6g0501 6 4625686 4628519 GST