Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0509 ATGGAAGTGTTATTATTATGTGGCCAGGAACGACACACGAAACGTGCATTTGTCTCTTTTCCTGTGTTTCTTCCTCGTTTGAGTTTGTGTTTGTGCTATCTTCTTCGCTCTTCACTTTTGTTGTCTAACATGGCTTTGGTGAATCCGTTTCTGTGTACCACTCGAACTTCCCTCCCTCTGCGAGTTTCAGGTCCACCAAACCAAGTCCTACCACGTTGGACTCTCTGCTCCCAATATTCATTCAAAACATCATCACTAAGATCGAAGCAACTCAGGTGTGGCGCCACTGCAGACATCAAAGCAGATCACGCGGTTCTTGTGGGCCCCACCAGCGAGGAGGAGAGAAAAGGGGACTATGACTGGACACAGGAATGGTACCCTTTGTATCTCACTCAGAATGTGCCCGAAGATGCACCTTTGGGTCTCAGAGTGTTTGATAAACAGCTCGTGTTGTTCAAGGATGGCAATGGCCAGTTTCGCTGTTACGAAGATCGCTGCCCCCACCGGTTAGCGAAACTATCTGAGGGACAGTTGATTGATGGAAGGCTCGAGTGTCTATACCATGGATGGCAATTTGAAGGGGAGGGAAAATGTGTGAAGATACCTCAGCTTCCAGCTGATGCCAAAATCCCAAGGGCTGCTTGTGTTAAAACATATGAAGTGAGGGACTCTCAAGGTGTTATTTGGGTATGGATGTCCCTCAAGACACCTCCAAATGTCAGTAAATTACCTTGGTTTGAGAACTTCGCAAGGCCGGGGTTTCAAGATGTTTCGACAATTCACGAACTCCCTTATGATCACTCTATTCTTCTGGAGAACCTGATGGATCCTGCTCATATCCCAATCTCCCATGACAGAACAGATTGGACTGCGAAAAGGGAGGATGCTCAGCCGCTGTGTTTTGAGGTGACCGAACGAACAGATAGAGGGTTTGCAGGTTGGTGGGGCAGAGAGAAAGATGGATCCATGCCTAACTTCTTGCGGTTTGAGGCTCCTTGTGTTCTACAAAACAACAGGGAAATTATTGATAAGAATGGTGAAATAAACTACTTCAGTGGCCTGTTCCTTTGTAGACCAACCGGGCAAGGGAAATCCATGCTGATAGTTAGGTTTGGAGGAACAAAAAGATCTCCACTAGCAAAAGTGTTTCCTAAGTGGTACTTCCATCAGAATGCAAGCAAGGTGTTTGAGCAAGACATGGGATTCTTGTCATCACAAAATGAAATTCTTCTGAGAGAAAAGGTTCCAACAAAGGAACTATACCTGAATCTGAAATCATCAGACACATGGGTTGCTGAATACAGGAAGTGGATGGACAAAGCGGGGCATGGAATGCCATATCATTTTGGTCACAGCACTATCTCTTTGCCTAAAGAGCCTGCTGTGGTTGAACACGCACCTGCTGGACTAGTCGCAGGACAATCAGCTTCCTCACCAACCAAGGGGGGCATTGGAACAATGCATGCCCCTAATTTTGCCAACAGATATTTTAGGCATGTGATTCATTGCAAAGGATGTAGAACCGTCGTCAAAGCTTTCGAAGCTTGGAAAAATGCTCTTTCAGCTGTGGCAATTGCATTAACTGCGTTGGCAATTCTGCTTTCTGGGAGACAATGGAAGGTCCTTCTCTTGGCATCTGCAGCTCTCTGCTCTGTTGGAGTCTATGCTTGCTCAACCGCCATTGCAATGAATACAACAAATTTTATTAGGACACATAGGAGATTGTGA 1728 0.4595 MEVLLLCGQERHTKRAFVSFPVFLPRLSLCLCYLLRSSLLLSNMALVNPFLCTTRTSLPLRVSGPPNQVLPRWTLCSQYSFKTSSLRSKQLRCGATADIKADHAVLVGPTSEEERKGDYDWTQEWYPLYLTQNVPEDAPLGLRVFDKQLVLFKDGNGQFRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRAACVKTYEVRDSQGVIWVWMSLKTPPNVSKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLCFEVTERTDRGFAGWWGREKDGSMPNFLRFEAPCVLQNNREIIDKNGEINYFSGLFLCRPTGQGKSMLIVRFGGTKRSPLAKVFPKWYFHQNASKVFEQDMGFLSSQNEILLREKVPTKELYLNLKSSDTWVAEYRKWMDKAGHGMPYHFGHSTISLPKEPAVVEHAPAGLVAGQSASSPTKGGIGTMHAPNFANRYFRHVIHCKGCRTVVKAFEAWKNALSAVAIALTALAILLSGRQWKVLLLASAALCSVGVYACSTAIAMNTTNFIRTHRRL* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0509 575 Pfam Pheophorbide a oxygenase 329 414 IPR013626 GO:0010277
Gso4g0509 575 PANTHER PROTEIN TIC 55, CHLOROPLASTIC 103 575 - -
Gso4g0509 575 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 103 575 - -
Gso4g0509 575 Pfam Rieske [2Fe-2S] domain 124 206 IPR017941 GO:0051537
Gso4g0509 575 Gene3D - 252 443 - -
Gso4g0509 575 Gene3D - 120 248 IPR036922 GO:0051537
Gso4g0509 575 SUPERFAMILY ISP domain 115 238 IPR036922 GO:0051537
Gso4g0509 575 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 125 230 IPR017941 GO:0051537
Gso4g0509 575 SUPERFAMILY Bet v1-like 226 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0509 Gso-Chr4 4875544 4878180 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0509 - - gmx:100808233 1152.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0509 4 4875544 4878180 Gso6g0501 6 4625686 4628519 GST