Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0466 ATGTTACTGTACAAGTACTTGAGTACTACATTGTATAGAACTTGGAATACTATATACTACATCTTCCTCCATGGAGAAGAACACAAACTGAACTTGTTGCTTTCTAGTTTCGCTTCACACTTCACACTTAACGTATCCGCCAAATCTAGGGGCATATTCCATTCCACCACCATTTCTCTGCAAAAGAGACCCTTTTGCTTCTTTTCAGATAACATGGGCTTAGTCTGCAGCAGAGGTCGTCGTTTTCGTGAAGCTGATGCTGAAGAAAATGCTCAGGATGCAGAAATTGAAAGAAGAATCAAGTTAGAAACAAAGGCTGAAAAGCATATTCAGAAACTTTTATTACTAGGTGCTGGAGAGTCTGGGAAGTCTACAATCTTTAAGCAGATAAAACTTTTGTTTCAAACTGGCTTTGACGAGGCTGAGCTAAAAAGCTACATACCAGTCATTCATGCTAATGTGTATCAGGCAATAAAAGTACTGCATGATGGGTCAAAAGAGTTGGCGCAGAATGATGTTGATTCTTCAAAGTATGTAATATCTCATGAAAACCAGAACATTGGTGAAAAGCTCTCAGAAATTGGAGCCAGGCTGGATTATCCTTGTTTTACCAAAGAGCTTGCACAGGAAATAGAGAGACTGTGGGAGGATGCTGCAATTCAGGAAACATGTGCCCGTGGTAATGAACTCCAAGTTCCAGATTGTGCCCATTATTTCATGGAAAATTTGGAGAGGCTGTCTGATGCAAACTATGTTCCAACAAAGGAGGATGTTTTGTATGCAAGAGTTCGTACAACTGGTGTTGTTGAGATCCAGTTCAGCCCTGTTGGAGAAAATAAGAGAAGTGGTGAAGTCTATAGACTCTTTGATGTTGGTGGTCAGAGAAATGAGAGGAGAAAATGGATCCATCTTTTTGAAGGAGTTACAGCTGTAATATTCTGTGCTGCAATTAGCGGGTATGATCAGACACTTTATGAGGATGAAAACAAGAACAGAATGATGGAGACTAAGGAACTTTTCGAGTGGGTCCTGAAGCAACCATGTTTTGAGAAAACATCCTTCATGTTATTTTTAAACAAGTTTGACATATTTGAAAAGAAGATCCTGAATGTTCCGCTCAATGTATGTGAGTGGTTCAAAGATTACCAGCCAGTTTCAACAGGGAAACAAGAGATCGAACATGCGTACGAGTTTGTGAAGAAAAAGTTTGAGGAATTGTATTTCCAGAGCACTGCTCCTGACCGTGTAGATCGCGTGTTCAAGATCTATCGGACGACTGCCCTTGATCAGAAGCTTGTGAAGAAGACTTTCAAGCTTGTTGATGAGACTTTGAGACGGAGGAATCTCTTTGAAGCTGGCTTATTATGA 1368 0.4028 MLLYKYLSTTLYRTWNTIYYIFLHGEEHKLNLLLSSFASHFTLNVSAKSRGIFHSTTISLQKRPFCFFSDNMGLVCSRGRRFREADAEENAQDAEIERRIKLETKAEKHIQKLLLLGAGESGKSTIFKQIKLLFQTGFDEAELKSYIPVIHANVYQAIKVLHDGSKELAQNDVDSSKYVISHENQNIGEKLSEIGARLDYPCFTKELAQEIERLWEDAAIQETCARGNELQVPDCAHYFMENLERLSDANYVPTKEDVLYARVRTTGVVEIQFSPVGENKRSGEVYRLFDVGGQRNERRKWIHLFEGVTAVIFCAAISGYDQTLYEDENKNRMMETKELFEWVLKQPCFEKTSFMLFLNKFDIFEKKILNVPLNVCEWFKDYQPVSTGKQEIEHAYEFVKKKFEELYFQSTAPDRVDRVFKIYRTTALDQKLVKKTFKLVDETLRRRNLFEAGLL* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0466 455 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 72 455 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso6g0466 455 SUPERFAMILY Transducin (alpha subunit), insertion domain 138 263 IPR011025 GO:0007165
Gso6g0466 455 ProSiteProfiles G-alpha domain profile. 109 455 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso6g0466 455 PRINTS Alpha G protein (transducin) signature 112 127 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso6g0466 455 PRINTS Alpha G protein (transducin) signature 251 273 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso6g0466 455 PRINTS Alpha G protein (transducin) signature 286 303 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso6g0466 455 PRINTS Alpha G protein (transducin) signature 308 336 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso6g0466 455 PRINTS Alpha G protein (transducin) signature 354 363 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso6g0466 455 SMART galpha_1 90 454 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso6g0466 455 CDD G-alpha 111 449 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso6g0466 455 Pfam G-protein alpha subunit 93 443 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso6g0466 455 PRINTS Plant G protein alpha subunit signature 98 107 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gso6g0466 455 PRINTS Plant G protein alpha subunit signature 148 161 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gso6g0466 455 PRINTS Plant G protein alpha subunit signature 163 177 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gso6g0466 455 PRINTS Plant G protein alpha subunit signature 187 201 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gso6g0466 455 PRINTS Plant G protein alpha subunit signature 271 286 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gso6g0466 455 PRINTS Plant G protein alpha subunit signature 341 352 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gso6g0466 455 PRINTS Plant G protein alpha subunit signature 390 405 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gso6g0466 455 PRINTS Plant G protein alpha subunit signature 407 419 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gso6g0466 455 Gene3D - 112 443 IPR027417 -
Gso6g0466 455 Gene3D - 139 264 IPR011025 GO:0007165
Gso6g0466 455 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-1 SUBUNIT 72 455 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gso6g0466 455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 452 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0466 Gso-Chr6 4289515 4295580 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0466 K19729 - gmx:100800120 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0484 4 4582235 4588236 Gso6g0466 6 4289515 4295580 GST