Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0484 ATGGGCTTAGTCTGCAGCAGAAGTCGTCGTTTTCGTGAAGCTGATGCTGAAGAAAATGCTCAGGATGCAGAAATTGAAAGAAGAATCGAGTTAGAAACAAAGGCTGAAAAGCATATTCAGAAACTTTTACTACTAGGTGCTGGAGAGTCTGGGAAGTCTACAATATTTAAGCAGATAAAACTTTTGTTTCAAACTGGCTTTGATGAGGCTGAGCTAAAAAGCTACATACCAGTCGTTCATGCTAATGTGTATCAGACAATAAAAGTACTGCATGATGGGTCGAAAGAGTTGGCGCAGAATGACTTTGATTCTTCAAAGTATGTAATATCTAATGAAAACCAGGACATTGGTGAAAAGCTCTCAGAAATTGGAGGCAGGCTGGATTACCCGCGTCTTACCAAAGAGCTTGCACAGGAAATAGAGACTCTGTGGGAGGATGCTGCAATTCAGGAAACATATGCCCGTGGTAATGAACTCCAAGTTCCAGATTGTGCCCATTATTTCATGGAAAATTTGGAGAGGCTGTCTGATGCAAATTATGTTCCAACTAAGGAGGATGTTTTGTATGCAAGAGTTCGTACAACTGGTGTTGTTGAGATCCAGTTCAGCCCTGTTGGAGAAAATAAGAGAAGTGGTGAAGTCTATAGACTCTTTGATGTTGGTGGCCAGAGAAATGAGAGAAGAAAATGGATCCATCTTTTTGAAGGAGTTACGGCTGTAATATTCTGTGCTGCAATTAGCGAGTATGATCAGACACTTTATGAGGATGAAAACAAGAACAGAATGATGGAGACTAAGGAACTTTTTGAGTGGGTCCTAAGGCAACCATGTTTTGAGGTTCCGCTCAATGTATGTGAGTGGTTCAAAGATTACCAGCCAGTTTCAACAGGGAAACAAGAGATTGAACATGCGTACGAGTTTGTGAAGAAAAAGTTTGAGGAATTGTATTTCCAGAGCACTGCTCCTGACTGTGTAGATCGCGTGTTCAAGATCTATCAGGCGACTGCCCTTGATCAGAAGCTTGTGAAGAAGACTTTCAAGCTTGTTGATGAGACTTTGAGACGGAGGAATCTCTTTGAAGCTGGCTTATTATGA 1095 0.4137 MGLVCSRSRRFREADAEENAQDAEIERRIELETKAEKHIQKLLLLGAGESGKSTIFKQIKLLFQTGFDEAELKSYIPVVHANVYQTIKVLHDGSKELAQNDFDSSKYVISNENQDIGEKLSEIGGRLDYPRLTKELAQEIETLWEDAAIQETYARGNELQVPDCAHYFMENLERLSDANYVPTKEDVLYARVRTTGVVEIQFSPVGENKRSGEVYRLFDVGGQRNERRKWIHLFEGVTAVIFCAAISEYDQTLYEDENKNRMMETKELFEWVLRQPCFEVPLNVCEWFKDYQPVSTGKQEIEHAYEFVKKKFEELYFQSTAPDCVDRVFKIYQATALDQKLVKKTFKLVDETLRRRNLFEAGLL* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0484 364 SMART galpha_1 19 363 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso4g0484 364 ProSiteProfiles G-alpha domain profile. 38 364 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso4g0484 364 Pfam G-protein alpha subunit 22 352 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso4g0484 364 Gene3D - 68 193 IPR011025 GO:0007165
Gso4g0484 364 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-1 SUBUNIT 1 364 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gso4g0484 364 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 361 IPR027417 -
Gso4g0484 364 Gene3D - 41 352 IPR027417 -
Gso4g0484 364 SUPERFAMILY Transducin (alpha subunit), insertion domain 67 192 IPR011025 GO:0007165
Gso4g0484 364 CDD G-alpha 40 358 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso4g0484 364 PRINTS Alpha G protein (transducin) signature 41 56 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso4g0484 364 PRINTS Alpha G protein (transducin) signature 180 202 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso4g0484 364 PRINTS Alpha G protein (transducin) signature 215 232 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso4g0484 364 PRINTS Alpha G protein (transducin) signature 237 265 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso4g0484 364 PRINTS Plant G protein alpha subunit signature 27 36 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gso4g0484 364 PRINTS Plant G protein alpha subunit signature 77 90 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gso4g0484 364 PRINTS Plant G protein alpha subunit signature 92 106 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gso4g0484 364 PRINTS Plant G protein alpha subunit signature 116 130 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gso4g0484 364 PRINTS Plant G protein alpha subunit signature 200 215 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gso4g0484 364 PRINTS Plant G protein alpha subunit signature 299 314 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gso4g0484 364 PRINTS Plant G protein alpha subunit signature 316 328 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Gso4g0484 364 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 1 364 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0484 Gso-Chr4 4582235 4588236 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0484 K19729 - gmx:547804 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0484 4 4582235 4588236 Gso6g0466 6 4289515 4295580 GST