Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0456 ATGGACAGGGTTTCGCCGAACCGGCGTCGTTCCGACGGAGAGAGTAGTTCTGCTTCCGCTGGGGACACTCGCCAGAAGCGCGCCAGAGTTTACTTCGATTTCGATGGCACTCATTGTATTGTGAAGTGTTCAAATGCTGGGAATTCCAGTGCATCTGTTGAAGAATTTGTGGATTATGATAATTTTCAAGGATCCTCTCTTCTTCGATCCAACGATGATGATGCTGGCGAAGAGAGTAACTTCGACGAAGGAGATGGTAATGACATCTCAAAAGTGGATGATCTAGAGGTCAAGATGGATCTTACGGATGACTTGTTGCATATGGTTTTCTCGTTTTTGGATCATCCCAATCTCTGCAGAGCTGCTAGAGTTTGTAAGCAGTGGCGGACTGCTAGTGCTCATGAAGACTTCTGGAAGAGTTTGAATTTTGAAGACCGGAACATATCTGTAGAGCAATTTGAGGACATCTGTAGGCGTTATCCTAATATAACAGCAATCCGTATGTCTGGTCCTGCCTCTAACCAGCTTGTCATGAAGGCCATCTCTTCGTTAAGAAATCTTGAGGCTTTAACATTGGGAAAAACTCATATAATGGATAATTTTTTCCATGCTTTGGCCGATTGTTCTATGTTGAGAAGACTAAGCATCAATGATGCTATACTTGGCAGTGGTCTGCAGGAGATATCAGTCAACCACGACAGACTGTGTCATCTCCAATTGACAAAGTGCCGTGTGATGCGTATGACAGTCAGGTGCCCACAACTTGAAATTATGTCATTGAAGCGTAGTAACATGGCACAGACTGTGCTCAATTGTCCCCTTTTGCAAGAGCTTGATATAGGCTCTTGCCACAAACTTCCTGATTCTGCTATTCGTTCAGCTGTTACGTCATGCCCACAATTAGTTTCTTTGGACATGTCTAATTGTTCGAGTGTTAGTGATGAAACATTACGGGAAATATCACAGAATTGTGCTAACCTTAGTTTTCTTGATGCATCGTACTGCCCCAACATATCCTTGGAGACTGTTAGACTGCCAATGTTAACAGTTCTGAAGCTTCACAGTTGTGAAGGCATCACTTCTGCCTCTATGACTGCAATATCTCACAGTTATATGTTGGAGGTTTTGGAGCTTGATAATTGTAGCCTGTTGACATCAGTGTCTTTAGATCTTCCCCGCTTGCAGAATATTAGATTGGTACACTGTCGCAAATTTGCTGATTTGAACTTGATGACCCTAATGTTGTCTTCTATTTTGGTGTCCAATTGCCCTGTGCTCCATCGTATCAACATCACTTCAAATTCACTTCAAAAATTAACAATACCAAAGCAGGACAGCTTAACCACATTAGCTCTGCAATGCCAATCTTTACAAGAAGTGGATCTCTCTGAGTGTGAATCTTTGAATAACTCTGTATGCAATGTTTTTAATGATGGTGGAGGTTGCCCGATGTTGAAATCGTTAGTTCTTGATAATTGTGAGAGTTTGACGTCAGTTCAGTTCATCAGTACCTCTCTAATCAGTCTTTCGCTTGGTGGTTGCCGTGCAATAACTAATCTTGAACTCACATGCCCTAATCTAGAGAAAGTTATTTTGGATGGCTGTGATCATTTGGAAAGAGCATCATTTTGTCCAGTTGGTCTTTTATCTCTCAATTTAGGAATATGTCCAAAATTGAACACACTCAGCATTGAAGCACCGTTTATGGTTTCACTTGAGTTGAAAGGATGTGGTGTACTATCTGAAGCATTCATTAATTGTCCACTCCTAACATCTCTCGATGCTTCCTTTTGCAGCCAACTAACAGATGGTTGCTTGTCTGCAACAACTGTCTCATGCCCACTGATCGAATCATTGATATTGATGTCATGCTCTTCAATTGGTTCAGATGGTCTTCGATCTCTGTATTGTCTTCCAAATTTGATTGTTCTTGACTTATCATACACTTTCTTGGTGAACTTGCAGCCTATCTTTGATTCTTGTTTGCAACTAAAGGTTTTAAAGCTGCAAGCATGCAAATATCTCACTGACACATCACTTGAACCTCTTTACAAAGGAGGTGCTTTACCAGCACTTCAGGAGTTGGACTTATCTTATGGAACTCTTTGTCAATCAGCCATAGATGAGCTTCTTGCTTACTGCACAAACCTCACTCATGTGAGCTTGACTGGCTGTGTGAATATGCATGATTTGAATTGGGGAAGTAGTTGTGGGCAAAGTGACAATTTCCCTGCTGTAAACACCCCATCTAGGGCAAGTTCTAATGAGAATATCCCTGAATCAAGTGAGCAATCCACTCGCTTACTGCAAAACCTCAACTGTGTTGGATGTCCAAATATTAGGAAGGTTGTCATTCCATTGAGGGCAAATTGTTTTCATTTGTTATTTTTAAACCTTTCACTCTCGGCAAATTTGAAAGAGGTTGATGTTACTTGTCTCAACCTATGCTTTCTTAATTTAAGCAATTGTTCCTCTTTGGAAATTTTGAAGCTAGAGTGTCCAAAATTGACCAGTCTGTTCCTTCAGTCTTGCAATATTGACGAGGAAGCTGTTGAAGCTGCCATATCAAAATGCTCTATACTGGAGACCCTTGACGTTCGCTTTTGTCCAAAGATAAGCTCAATGAGCATGGGAAGATTACGCACAATTTGTTCAAGTTTGAAGCGAATATTCAGCAGTTAG 2682 0.4116 MDRVSPNRRRSDGESSSASAGDTRQKRARVYFDFDGTHCIVKCSNAGNSSASVEEFVDYDNFQGSSLLRSNDDDAGEESNFDEGDGNDISKVDDLEVKMDLTDDLLHMVFSFLDHPNLCRAARVCKQWRTASAHEDFWKSLNFEDRNISVEQFEDICRRYPNITAIRMSGPASNQLVMKAISSLRNLEALTLGKTHIMDNFFHALADCSMLRRLSINDAILGSGLQEISVNHDRLCHLQLTKCRVMRMTVRCPQLEIMSLKRSNMAQTVLNCPLLQELDIGSCHKLPDSAIRSAVTSCPQLVSLDMSNCSSVSDETLREISQNCANLSFLDASYCPNISLETVRLPMLTVLKLHSCEGITSASMTAISHSYMLEVLELDNCSLLTSVSLDLPRLQNIRLVHCRKFADLNLMTLMLSSILVSNCPVLHRINITSNSLQKLTIPKQDSLTTLALQCQSLQEVDLSECESLNNSVCNVFNDGGGCPMLKSLVLDNCESLTSVQFISTSLISLSLGGCRAITNLELTCPNLEKVILDGCDHLERASFCPVGLLSLNLGICPKLNTLSIEAPFMVSLELKGCGVLSEAFINCPLLTSLDASFCSQLTDGCLSATTVSCPLIESLILMSCSSIGSDGLRSLYCLPNLIVLDLSYTFLVNLQPIFDSCLQLKVLKLQACKYLTDTSLEPLYKGGALPALQELDLSYGTLCQSAIDELLAYCTNLTHVSLTGCVNMHDLNWGSSCGQSDNFPAVNTPSRASSNENIPESSEQSTRLLQNLNCVGCPNIRKVVIPLRANCFHLLFLNLSLSANLKEVDVTCLNLCFLNLSNCSSLEILKLECPKLTSLFLQSCNIDEEAVEAAISKCSILETLDVRFCPKISSMSMGRLRTICSSLKRIFSS* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0456 893 SUPERFAMILY F-box domain 100 131 IPR036047 GO:0005515
Gso6g0456 893 SMART LRR_CC_2 524 549 IPR006553 -
Gso6g0456 893 SMART LRR_CC_2 391 416 IPR006553 -
Gso6g0456 893 SMART LRR_CC_2 272 297 IPR006553 -
Gso6g0456 893 SMART LRR_CC_2 858 889 IPR006553 -
Gso6g0456 893 SMART LRR_CC_2 298 323 IPR006553 -
Gso6g0456 893 SMART LRR_CC_2 661 686 IPR006553 -
Gso6g0456 893 SMART LRR_CC_2 482 512 IPR006553 -
Gso6g0456 893 SMART LRR_CC_2 587 612 IPR006553 -
Gso6g0456 893 SMART LRR_CC_2 454 478 IPR006553 -
Gso6g0456 893 SMART LRR_CC_2 833 857 IPR006553 -
Gso6g0456 893 SMART LRR_CC_2 613 638 IPR006553 -
Gso6g0456 893 SMART LRR_CC_2 345 370 IPR006553 -
Gso6g0456 893 SMART LRR_CC_2 714 736 IPR006553 -
Gso6g0456 893 ProSiteProfiles F-box domain profile. 95 141 IPR001810 GO:0005515
Gso6g0456 893 SUPERFAMILY RNI-like 524 889 - -
Gso6g0456 893 PANTHER OS10G0396666 PROTEIN 20 858 IPR044703 GO:0010252|GO:1905393
Gso6g0456 893 Gene3D Ribonuclease Inhibitor 653 737 IPR032675 -
Gso6g0456 893 Gene3D Ribonuclease Inhibitor 94 344 IPR032675 -
Gso6g0456 893 Gene3D Ribonuclease Inhibitor 345 504 IPR032675 -
Gso6g0456 893 Gene3D Ribonuclease Inhibitor 746 892 IPR032675 -
Gso6g0456 893 Gene3D Ribonuclease Inhibitor 505 652 IPR032675 -
Gso6g0456 893 MobiDBLite consensus disorder prediction 1 24 - -
Gso6g0456 893 SMART fbox_2 101 141 IPR001810 GO:0005515
Gso6g0456 893 SUPERFAMILY L domain-like 411 565 - -
Gso6g0456 893 SUPERFAMILY RNI-like 122 388 - -
Gso6g0456 893 MobiDBLite consensus disorder prediction 68 88 - -
Gso6g0456 893 Pfam F-box-like 103 143 IPR001810 GO:0005515
Gso6g0456 893 PANTHER OS10G0396666 PROTEIN 20 858 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0456 Gso-Chr6 4201019 4207041 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0456 - - gmx:100786178 1742.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0477 4 4491068 4497265 Gso6g0456 6 4201019 4207041 GST