Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0477 ATGGAGAGGAACCGGCGTCGTTCCGACGGAGAGAGTAGTTCCGTTTCCGCTGAGGACACTCGCCGGAAGCGCGCCAGAGTCTACTTCGATTTCGATGGCCCTCATTGTATTGTGAAGTGTTCAAATGCTGGGAAATCCAGTGCATCTGTTGATGAATTTGTGGATTATGATAATTTTCAAAGATCGTCTCTTCGATCCAACGATGATGATGCATTGAGGTCGATGTCTGCTGGTGAGGAGAGTAACTTTGACGAAGGAGATGACAGTGACATCTCAAAAGTGGATGATCTAGAGGTCAAGATGGATCTTACGGATGACTTATTACATATGGTCTTTTCGTTTTTGGATCATCCCAATCTCTGCAAAGCTGCTAGAGTCTGTAAGCAGTGGTGGACTGCTAGTGCTCATGAAGTCTTCTGGAAGAGTTTGAATTTTGAAGATCGGAGCATATCTGTAGAGCAATTTGAGGACATCTGTAGGCGTTATCCTAATATCATGGCAATCCGTATGTCTGGTCCTGCCTGTAACCAGCTTGTCATGAAGGCCATTTCTTCGTTAAGAAATCTTGAGGCTTTAACATTGGGAAGAGCTCATATAATGGATAATTTTTTCCATGCTTTGGCCGATTGTTCTATGTTGAAAAGACTGACCATCAATGATGCTATACTTGGCAGTGGTATTCAGGAGATATCAGTCAATCACGACAGGCTGTGTCATCTCCAATTGACAAAGTGCCGTGTGATGCGTATAGCAGTCAGGTGCCCACAACTTGAAACTATGTCATTGAAGCGCAGTAACATGGCACAGACTGCGCTCAATTGCCCCCTTTTGCAAGAGCTTGATATAGGCTCTTGCCACAAACTTCCTGATTCTGCTATTCGTTCAGCTGTTACATCATGCTCGCAATTAGTTTCTTTGGACATGTCTAATTGTTCGAGTGTTAGTGATGAAACATTACGAGAAATATCCATGAATTGTGCTAACCTTAGTTTTCTTGATGCATCGTACTGCCCCAACCTATTCTTGGAGACTGTTAGACTGCCAATGTTAACAGTTCTGAAGCTTCACAGTTGTGATGGCATCACTGCAGCCTCAATGGCTGCAATATCTCACAGTTATATGTTGGAGGTTTTGGAGCTTGATAATTGTAGCCTATTGACATCAGTGTCTTTAGACCTTCCCCGCTTGCAGAATATTAGATTGGTACACTGTCGCAAATTTGCTGATTTGAACTTGATGACCCTAACGTTGTCGTCTATCTTGGTGTCCAATTGCCCTGTGCTCCATCGTATCAACATCACTTCAAATTCACTTCAAAAATTAACAATACCAAAGCAGGACAGTTTAACCACATTAGCTCTGCAATGCCAATCTTTACAAGAAGTGGATCTCTCTGAGTGTGAATCTTTGAATAACTCTGTATGCAATGTTTTTAATGATGGTGGAGGTTGCCCAATGTTGAAATCGTTAGTTCTTGGTAATTGTGAGAGTTTGACATCAGTTCAGTTCATCAGTACCTCTCTAATCAGTCTTTCCCTTGGTGGTTGCCGTGCAATAACTAATCTTGAACTCACATGCCCTAATCTAGAGAAAGTTATTTTGGATGGCTGTGATCATTTGGAAAGAGCATCATTTTGTCCAGTTGGTCTTTTATCTCTCAATTTAGGAATATGTCCAAAATTGAACACACTCAGCATTGAAGCACCGTTTATGGTTTCACTTGAGTTGAAAGGATGTGGTGTACTATCTGAAGCATTCATTAATTGTCCACTCTTAGCATCTCTCGATGCTTCCTTTTGCAGCCAACTAACGGATGGCTGCTTGTCTGCAACAACTGTCTCATGCCCACTGATTGAATCATTGATATTAATGTCATGCTCATCAATTGGTTCAGAGGGTCTTCGATCTCTGTATTGTCTTCCAAATTTGACTGTTCTTGACTTATCATACACTTTCTTGGTGAACATGCAGCCTGTCTTTGATTCTTGTTTGCAACTAAAGGTTTTAAAGCTGCAAGCATGCAAATATCTCACTGAAACATCACTTGAACCTCTTTACAAAGGAGGTGCTTTGCCAGCACTTCAGGAGTTGGACTTGTCTTATGGAACTCTCTGTCAATCAGCCATAGATGAGCTTCTTGCTTGCTGCACAAACCTAACTCATGTGAGTTTGAATGGCTGTGTGAATATGCATGATTTGAATTGGGGAAGCAGTCGTGGGCAAAGTGACAATTTCCCTGCTGTAAACACCCCATCCTGGGCAAGTTCTAATGAGATTATCTCTGAATCAAGTGAGCACTCTGCTCGCTTACTACAAAACCTCTACTGTGTTGGATGTCCAAATATTAGGAAGGTTGTCATTCCATTGAGGGAAAATTGTTTTCATTTGTTATTTTTAAACCTTTCGCTCTCGGCAAATTTGAAAGTGGTTGATGTCACATGTCTCAACCTATGCTTTCTTAATTTAAGCAATTGTTCCTCTTTGGAAATTTTGAAGTTAGAGTGTCCAAAATTGACCAGTCTATTCCTTCAGTCTTGCAATATTGACGATGAAGCTGTTGAAGCTGCTATATCAAAATGCACTATGCTGGAGACTCTTGACGTTCGCTTTTGTCCAAAGATAAGCTCAATAAGCATGGGAAGATTACGCACAATTTGTTCAAGTTTGAAGCGAATATTTAGCAGTTAG 2688 0.4126 MERNRRRSDGESSSVSAEDTRRKRARVYFDFDGPHCIVKCSNAGKSSASVDEFVDYDNFQRSSLRSNDDDALRSMSAGEESNFDEGDDSDISKVDDLEVKMDLTDDLLHMVFSFLDHPNLCKAARVCKQWWTASAHEVFWKSLNFEDRSISVEQFEDICRRYPNIMAIRMSGPACNQLVMKAISSLRNLEALTLGRAHIMDNFFHALADCSMLKRLTINDAILGSGIQEISVNHDRLCHLQLTKCRVMRIAVRCPQLETMSLKRSNMAQTALNCPLLQELDIGSCHKLPDSAIRSAVTSCSQLVSLDMSNCSSVSDETLREISMNCANLSFLDASYCPNLFLETVRLPMLTVLKLHSCDGITAASMAAISHSYMLEVLELDNCSLLTSVSLDLPRLQNIRLVHCRKFADLNLMTLTLSSILVSNCPVLHRINITSNSLQKLTIPKQDSLTTLALQCQSLQEVDLSECESLNNSVCNVFNDGGGCPMLKSLVLGNCESLTSVQFISTSLISLSLGGCRAITNLELTCPNLEKVILDGCDHLERASFCPVGLLSLNLGICPKLNTLSIEAPFMVSLELKGCGVLSEAFINCPLLASLDASFCSQLTDGCLSATTVSCPLIESLILMSCSSIGSEGLRSLYCLPNLTVLDLSYTFLVNMQPVFDSCLQLKVLKLQACKYLTETSLEPLYKGGALPALQELDLSYGTLCQSAIDELLACCTNLTHVSLNGCVNMHDLNWGSSRGQSDNFPAVNTPSWASSNEIISESSEHSARLLQNLYCVGCPNIRKVVIPLRENCFHLLFLNLSLSANLKVVDVTCLNLCFLNLSNCSSLEILKLECPKLTSLFLQSCNIDDEAVEAAISKCTMLETLDVRFCPKISSISMGRLRTICSSLKRIFSS* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0477 895 Gene3D Ribonuclease Inhibitor 743 894 IPR032675 -
Gso4g0477 895 SUPERFAMILY RNI-like 508 891 - -
Gso4g0477 895 Gene3D Ribonuclease Inhibitor 96 343 IPR032675 -
Gso4g0477 895 SUPERFAMILY F-box domain 102 133 IPR036047 GO:0005515
Gso4g0477 895 PANTHER OS10G0396666 PROTEIN 17 860 IPR044703 GO:0010252|GO:1905393
Gso4g0477 895 SMART LRR_CC_2 456 480 IPR006553 -
Gso4g0477 895 SMART LRR_CC_2 589 614 IPR006553 -
Gso4g0477 895 SMART LRR_CC_2 274 299 IPR006553 -
Gso4g0477 895 SMART LRR_CC_2 300 325 IPR006553 -
Gso4g0477 895 SMART LRR_CC_2 860 885 IPR006553 -
Gso4g0477 895 SMART LRR_CC_2 526 551 IPR006553 -
Gso4g0477 895 SMART LRR_CC_2 716 738 IPR006553 -
Gso4g0477 895 SMART LRR_CC_2 663 688 IPR006553 -
Gso4g0477 895 SMART LRR_CC_2 835 859 IPR006553 -
Gso4g0477 895 SMART LRR_CC_2 393 418 IPR006553 -
Gso4g0477 895 SMART LRR_CC_2 484 514 IPR006553 -
Gso4g0477 895 SMART LRR_CC_2 347 372 IPR006553 -
Gso4g0477 895 SMART LRR_CC_2 615 640 IPR006553 -
Gso4g0477 895 Pfam F-box-like 105 145 IPR001810 GO:0005515
Gso4g0477 895 Gene3D Ribonuclease Inhibitor 558 657 IPR032675 -
Gso4g0477 895 Gene3D Ribonuclease Inhibitor 658 737 IPR032675 -
Gso4g0477 895 Gene3D Ribonuclease Inhibitor 429 548 IPR032675 -
Gso4g0477 895 Gene3D Ribonuclease Inhibitor 344 428 IPR032675 -
Gso4g0477 895 SUPERFAMILY RNI-like 124 390 - -
Gso4g0477 895 Pfam Leucine Rich repeat 835 855 IPR001611 GO:0005515
Gso4g0477 895 SMART fbox_2 103 143 IPR001810 GO:0005515
Gso4g0477 895 MobiDBLite consensus disorder prediction 1 21 - -
Gso4g0477 895 ProSiteProfiles F-box domain profile. 97 143 IPR001810 GO:0005515
Gso4g0477 895 PANTHER OS10G0396666 PROTEIN 17 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0477 Gso-Chr4 4491068 4497265 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0477 - - gmx:100803643 1747.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0477 4 4491068 4497265 Gso6g0456 6 4201019 4207041 GST