Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0431 ATGGAGGAAGGGTACCCCAGAAGCAAGTTCAAGACCGTGTGTGTCTTCTGTGGCAGCAACAGTGGCAACCGACAAGTCTTCAGTGACGCTGCGATTCAATTGGGCAATGAACTGGTTAAGAGGAACATAGACTTGGTGTATGGTGGGGGCAGTGTTGGGCTAATGGGCTTAATATCTCAGAGAGTGTATGATGGAGGCTGCCATGTCCTAGGGATCATTCCAAAAGCTCTCATGCCTCTCGAGATATCAGGTGAAACAGTAGGTGAAGTGAGAATTGTTTCAGATATGCACGAGCGTAAAGCTGCCATGGCTCAAGAAGCTGATGCATTTGTTGCTCTCCCTGGAGGATATGGAACCATGGAGGAGCTGTTGGAGATGATAACTTGGGCCCAACTTGGAATCCATAAAAAACCGGTTGGTCTACTGAATGTTGACGGTTACTATAACTGTTTGCTTGCATTATTTGACAATGGTGTTAAAGAAGGCTTCATTAAGCCTTGTGCACGGGATATAGTTGTCTCTGCTACGTCAGCCAAAGAACTTATGATGAAGATGGAGCACTACACTCCTTCGCACGAACATGTTGCCCCTCATGAGAGCTGGCAGATGAAGCAATTAGGTAATTATCCAGATGCAGAGTGA 642 0.4642 MEEGYPRSKFKTVCVFCGSNSGNRQVFSDAAIQLGNELVKRNIDLVYGGGSVGLMGLISQRVYDGGCHVLGIIPKALMPLEISGETVGEVRIVSDMHERKAAMAQEADAFVALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVKEGFIKPCARDIVVSATSAKELMMKMEHYTPSHEHVAPHESWQMKQLGNYPDAE* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0431 213 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
Gso6g0431 213 Gene3D - 9 204 - -
Gso6g0431 213 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 8 206 - -
Gso6g0431 213 PANTHER LOG FAMILY PROTEIN YJL055W 8 206 - -
Gso6g0431 213 TIGRFAM TIGR00730: TIGR00730 family protein 11 188 IPR005269 GO:0009691|GO:0016787
Gso6g0431 213 SUPERFAMILY MCP/YpsA-like 9 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0431 Gso-Chr6 3994586 3997515 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0431 K22522 - gmx:100785484 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0450 4 4258093 4260748 Gso6g0431 6 3994586 3997515 GST
Gso17g1927 17 38356010 38364046 Gso6g0431 6 3994586 3997515 PCT
Gso6g0431 6 3994586 3997515 Gso17g1927 17 38356010 38364046 PCT