Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0430 ATGGATTCTTCACAAGGGTCTACCATTGCTGGTTTCGTGGACAATGCATCCATTAAGAGAAATGAGTCTAGTTTTGATGGCGTTCCCGTGTATGTTAAGGAACTAATTGCCGGAGGCTTTGCTGGTGCGCTTTCTAAGACCTCTGTTGCACCCCTCGAACGGGTTAAGATACTTTGGCAGACAAGGACACCAGGATTTCATTCTCTTGGGGTGTATCAATCTATGAATAAGTTACTAAAGCATGAAGGTTTTCTAGGATTATATAAGGGAAATGGAGCTAGTGTTATCCGCATTGTTCCGTATGCAGCCTTGCATTTTATGACATATGAGCGCTACAAAAGTTGGATCTTGAATAATTATCCTGTGTTAGGTACAGGTCCTTTTATTGATCTTTTAGCAGGCTCTGCTGCAGGAGGAACTTCAGTTTTATGTACCTACCCCTTGGATCTTGCTCGTACCAAACTTGCTTACCAGGTGGCTGACACAAGAGGACTTATCAAAGATGGTATGAAAGGAGTTCAACCTGCACATAATGGCATTAAAGGCGTGCTTACAAGTGTCTATAAGGAAGGGGGAGTTCGTGGACTTTATAGGGGTGCAGGACCAACCCTTACTGGAATTCTTCCATATGCTGGTTTAAAGTTCTACATGTATGAGAAATTGAAGACTCATGTTCCTGAAGAACATCAAAAGTCCATTATGATGCGTCTTTCTTGTGGAGCTCTAGCTGGATTGTTTGGGCAGACTTTAACATACCCTTTAGATGTTGTCAAGAGACAGATGCAGGTTGGCAGCCTGCAAAATGCTGCCCATGAGGATGTCAGATACAAAAATACAATTGATGGACTTAGGACTATTGTTTGTAATCAAGGATGGAAGCAGCTGTTTCATGGCGTAAGCATTAACTATATAAGGATTGTTCCTTCAGCTGCAATTAGTTTCACCACATACGACATGGTGAAGTCTTGGCTTGGCATACCACCTCAACAAAAGTCTCAATCAGTTTCGGCAGCATGA 1017 0.4238 MDSSQGSTIAGFVDNASIKRNESSFDGVPVYVKELIAGGFAGALSKTSVAPLERVKILWQTRTPGFHSLGVYQSMNKLLKHEGFLGLYKGNGASVIRIVPYAALHFMTYERYKSWILNNYPVLGTGPFIDLLAGSAAGGTSVLCTYPLDLARTKLAYQVADTRGLIKDGMKGVQPAHNGIKGVLTSVYKEGGVRGLYRGAGPTLTGILPYAGLKFYMYEKLKTHVPEEHQKSIMMRLSCGALAGLFGQTLTYPLDVVKRQMQVGSLQNAAHEDVRYKNTIDGLRTIVCNQGWKQLFHGVSINYIRIVPSAAISFTTYDMVKSWLGIPPQQKSQSVSAA* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0430 338 Gene3D Mitochondrial carrier domain 29 325 IPR023395 -
Gso6g0430 338 SUPERFAMILY Mitochondrial carrier 32 319 IPR023395 -
Gso6g0430 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 224 IPR018108 -
Gso6g0430 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 231 323 IPR018108 -
Gso6g0430 338 PRINTS Mitochondrial carrier protein signature 34 47 IPR002067 GO:0055085
Gso6g0430 338 PRINTS Mitochondrial carrier protein signature 47 61 IPR002067 GO:0055085
Gso6g0430 338 PRINTS Mitochondrial carrier protein signature 90 110 IPR002067 GO:0055085
Gso6g0430 338 PRINTS Mitochondrial carrier protein signature 140 158 IPR002067 GO:0055085
Gso6g0430 338 PRINTS Mitochondrial carrier protein signature 197 215 IPR002067 GO:0055085
Gso6g0430 338 PRINTS Mitochondrial carrier protein signature 240 262 IPR002067 GO:0055085
Gso6g0430 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 29 115 IPR018108 -
Gso6g0430 338 PANTHER GRAVES DISEASE MITOCHONDRIAL SOLUTE CARRIER PROTEIN-LIKE 11 332 - -
Gso6g0430 338 PANTHER SOLUTE CARRIER FAMILY 25 11 332 - -
Gso6g0430 338 Pfam Mitochondrial carrier protein 31 119 IPR018108 -
Gso6g0430 338 Pfam Mitochondrial carrier protein 126 226 IPR018108 -
Gso6g0430 338 Pfam Mitochondrial carrier protein 231 324 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0430 Gso-Chr6 3981064 3986012 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0430 26 306 Organic Solute Cotransporters AT4G26180 55.516 2.32e-112 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0430 - - gmx:100784421 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0449 4 4239888 4244698 Gso6g0430 6 3981064 3986012 GST