Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0416 ATGGCTCTTCTGAGTCGAGCCTCTTCACGCTTCCCTCAGCTGGTTTCCCCTCAAAGGGTAGTTTCACTCCACACAACGCTCCCATCTCTGAACGCATCCCCATCCACAGCCACGCCTACACCATATGCCCCGCCACCGCCTCCGTCCGCTTCCTCTCCCGCCGGCGTTTCGAAGGCGGCGGAGTTCGTGATCTCGAAGGTGGACGATCTGATGAACTGGGCCCGCCGCGGCTCCATCTGGCCCATGACCTTCGGCCTCGCCTGCTGCGCCGTCGAAATGATGCACACCGGCGCCGCCCGCTACGATCTCGACCGCTTCGGCATCATTTTCAGGCCCAGCCCTCGCCAGTCTGATTGCATGATCGTCGCCGGCACTCTCACCAACAAGATGGCTCCCGCTCTTCGCAAGGTTTATGACCAAATGCCTGAGCCTAGATGGGTCGTCTCAATGGGAAGTTGTGCTAATGGAGGAGGATACTACCATTACTCTTACTCCGTAGTTCGGGGATGTGACAGGATTGTTCCTGTTGACATATATGTTCCAGGCTGTCCTCCAACTGCTGAGGCTTTGCTGTATGGACTCCTCCAGCTGCAGAAAAAGATCAATAGGCGCAAAGACTTCCTCCACTGGTGGACAAAGTGA 642 0.5701 MALLSRASSRFPQLVSPQRVVSLHTTLPSLNASPSTATPTPYAPPPPPSASSPAGVSKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKINRRKDFLHWWTK* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0416 213 TIGRFAM nuoB_fam: NADH-quinone oxidoreductase, B subunit 62 203 IPR006138 GO:0008137|GO:0048038|GO:0051539
Gso6g0416 213 PANTHER NADH DEHYDROGENASE 1 213 - -
Gso6g0416 213 Hamap NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 54 202 IPR006138 GO:0008137|GO:0048038|GO:0051539
Gso6g0416 213 PANTHER NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 7, MITOCHONDRIAL 1 213 - -
Gso6g0416 213 SUPERFAMILY HydA/Nqo6-like 61 205 - -
Gso6g0416 213 MobiDBLite consensus disorder prediction 32 55 - -
Gso6g0416 213 MobiDBLite consensus disorder prediction 38 52 - -
Gso6g0416 213 Pfam NADH ubiquinone oxidoreductase, 20 Kd subunit 88 197 IPR006137 GO:0051536
Gso6g0416 213 ProSitePatterns Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 169 185 IPR006138 GO:0008137|GO:0048038|GO:0051539
Gso6g0416 213 Gene3D - 59 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0416 Gso-Chr6 3869246 3871758 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0416 K03940 - gmx:100802267 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0434 4 4106830 4109455 Gso6g0416 6 3869246 3871758 GST
Gso14g0824 14 9044882 9047116 Gso6g0416 6 3869246 3871758 PCT
Gso6g0416 6 3869246 3871758 Gso14g0824 14 9044882 9047116 PCT