Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0824 ATGGCTCTCGTCACCCGAATCGGACTCACGTGGCGCCTCCCTCAGCGGCTAGTTTCCGCGTCTCTCCACAGCAATTCCACTGGCACCACCGCTCCCACTAGTTACTGTGCGTTGCCGCAGCCAACAGCGAATTCTTCCCCCGTGGGCCTCTCGAAGCCGGCGGAATTCGTGATCTCGAAGGTGGACTCCCTCTTGAACTGGGCCCGCACAGGGTCCATCTGGCCCATGACGTTTGGGCTGGCCTGTTGCGCTGTGGAGATGATGCACACGGGCGGGGCCCGTTATGATCTAGACCGCTTTGGAATCATTTTTAGGCCTAGCCCGCGTCAATCCGATTGCATGATCGTTGCTGGCACACTCACCAACAAGATGGCCCCTGCTCTTCGCAAGGTTTATGATCAAATGCCTGAGCCAAGGTGGGTGATCTCAATGGGAAGCTGTGCTAATGGAGGTGGATATTACCACTATTCATACGCTGTTGTTAGAGGATGTGACAGAATAGTTCCTGTTGACATATACGTTCCAGGTTGTCCTCCAACTGCAGAGGCTTTGCTATATGGCCTCCTCCAGCTGCAGAAGAAGATCAATAGGCGCAAGGACTTCCTCTGGTGGTGGACCAGGTGA 624 0.5513 MALVTRIGLTWRLPQRLVSASLHSNSTGTTAPTSYCALPQPTANSSPVGLSKPAEFVISKVDSLLNWARTGSIWPMTFGLACCAVEMMHTGGARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKINRRKDFLWWWTR* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0824 207 Gene3D - 45 203 - -
Gso14g0824 207 TIGRFAM nuoB_fam: NADH-quinone oxidoreductase, B subunit 56 197 IPR006138 GO:0008137|GO:0048038|GO:0051539
Gso14g0824 207 Hamap NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 48 196 IPR006138 GO:0008137|GO:0048038|GO:0051539
Gso14g0824 207 Pfam NADH ubiquinone oxidoreductase, 20 Kd subunit 82 191 IPR006137 GO:0051536
Gso14g0824 207 ProSitePatterns Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 163 179 IPR006138 GO:0008137|GO:0048038|GO:0051539
Gso14g0824 207 PANTHER NADH DEHYDROGENASE 16 207 - -
Gso14g0824 207 SUPERFAMILY HydA/Nqo6-like 55 204 - -
Gso14g0824 207 PANTHER NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 7, MITOCHONDRIAL 16 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0824 Gso-Chr14 9044882 9047116 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0824 K03940 - gmx:100814025 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0824 14 9044882 9047116 Gso4g0434 4 4106830 4109455 PCT
Gso14g0824 14 9044882 9047116 Gso6g0416 6 3869246 3871758 PCT
Gso4g0434 4 4106830 4109455 Gso14g0824 14 9044882 9047116 PCT
Gso6g0416 6 3869246 3871758 Gso14g0824 14 9044882 9047116 PCT