Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0401 ATGAAGGAGGACGCGGAGAAAGATAAAGGCAAAGACAACAATAGGATTTGGGGAGCTATTCTCTTCGGCTTAATTGGCGCCACCGTCACTACCTTTGCGGTCGGTCAGCTGCGGAGGAGTGTTGAATGGTTCTATACTCAGTCATCCTGGAAAGGAGAGAGAAATGGTTCTTTCCGATCAGCTTTACAGGAAGAGGCATGGAGGAGGCACAATAAGCGAATGCAAGAAGAGTTAGAGGAGGAGATGGAAAGAGTGGAACGAATAAGGCGTATGCAAAGTGTGTTTAACAGAGAAAGGAATAAGTATAAAAGAAGCTATGAGAGCTGGAGGGGAAGTGGTCCTGGTGCATATCATCAGCATTTCCAAAGAGAAGATTGGTACTGGAAGGCTGATACATCCTTTAGAGACAAGAGGACTAATTATCAAGAAACTCCAAGAGAGAGTGGAAACTATGCATTATCACATCATTACTCAGTTTTGGGTCTCGACAGGTTTAGAAAAACACCATATTCAGAAGCTGAGATTAAGACAGCATTTAGGACCAAGGCCAAGGAGTATCATCCTGATCAGAACCAGGATAATATAGTGGCAGCTGAGGCAAAGTTCAAGGAAGTGTTGACTTCATACGAGGCCATAAAACAGGAAAGAAAGAACCATCATTTGTAG 666 0.4354 MKEDAEKDKGKDNNRIWGAILFGLIGATVTTFAVGQLRRSVEWFYTQSSWKGERNGSFRSALQEEAWRRHNKRMQEELEEEMERVERIRRMQSVFNRERNKYKRSYESWRGSGPGAYHQHFQREDWYWKADTSFRDKRTNYQETPRESGNYALSHHYSVLGLDRFRKTPYSEAEIKTAFRTKAKEYHPDQNQDNIVAAEAKFKEVLTSYEAIKQERKNHHL* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0401 221 SUPERFAMILY Chaperone J-domain 154 218 IPR036869 -
Gso6g0401 221 PRINTS DnaJ domain signature 179 194 IPR001623 -
Gso6g0401 221 PRINTS DnaJ domain signature 197 217 IPR001623 -
Gso6g0401 221 CDD DnaJ 156 210 IPR001623 -
Gso6g0401 221 Coils Coil 64 91 - -
Gso6g0401 221 Gene3D DnaJ domain 136 221 IPR036869 -
Gso6g0401 221 ProSiteProfiles dnaJ domain profile. 155 217 IPR001623 -
Gso6g0401 221 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 219 - -
Gso6g0401 221 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 219 - -
Gso6g0401 221 Pfam DnaJ domain 156 218 IPR001623 -
Gso6g0401 221 SMART dnaj_3 154 217 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0401 Gso-Chr6 3726100 3731596 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0401 - - gmx:100776208 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0419 4 3884563 3892782 Gso6g0401 6 3726100 3731596 GST
Gso14g0802 14 8624033 8634322 Gso6g0401 6 3726100 3731596 PCT
Gso6g0401 6 3726100 3731596 Gso14g0802 14 8624033 8634322 PCT