Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0419 ATGAAGGAGGACGCAGAGAAAGATAAAGGCAATGACAACAATAAGATTTGGGGAGCTATTCTCTTCGGCTTCATTGGCGCCACCGTCACTACCTTTGCGGTCGGTCAGCTGCGGAGGAGTGCTGAATGGTTCTATACTCAGTTATCGAGGACACAGTCATCGTGGAAAGGAGAGAGTGGTGGTTCTTTCCGATCAGCTTTTCAGGAAGAGGCATGGAGGAGGCACAATAAGCGCATGCAAGAGGAGTTAGAGGAGGAGATCGAAAGAGTGGAACGAATAAGGCGCATGCAAAGTGTGTTTAACAGAGAAAGGAATAAGTACAAAAGAAGCTATGAGAGCTGGAGGGAAAGTGGTCCTGGTGCATATCATCAGCATTCCCAAAGAGAAGATTGGTACTGGAAGGCTGATACATCCTTTAGAGACAAGAGGACTAATTATCGAGAAACTCCAAGAGAGAGTGGAAACTATGCATTATCACATCACTACTCAGTTTTGGGTCTTGACAGGTTTAGAAAAACTCCATATTCAGAAGCTGAGATTAAGACAGCATTTAGGACCAAGGCCAAGGAGTATCATCCTGATCAGAACCAGGATAATATAGTGGCTGCTGAGGCAAAGTTCAAGGAAGTGTTGACTTCATACGAGGCCATAAAACAGGAAAGAAGGAACCATCATACGTAG 681 0.4493 MKEDAEKDKGNDNNKIWGAILFGFIGATVTTFAVGQLRRSAEWFYTQLSRTQSSWKGESGGSFRSAFQEEAWRRHNKRMQEELEEEIERVERIRRMQSVFNRERNKYKRSYESWRESGPGAYHQHSQREDWYWKADTSFRDKRTNYRETPRESGNYALSHHYSVLGLDRFRKTPYSEAEIKTAFRTKAKEYHPDQNQDNIVAAEAKFKEVLTSYEAIKQERRNHHT* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0419 226 ProSiteProfiles dnaJ domain profile. 160 222 IPR001623 -
Gso4g0419 226 PRINTS DnaJ domain signature 184 199 IPR001623 -
Gso4g0419 226 PRINTS DnaJ domain signature 202 222 IPR001623 -
Gso4g0419 226 SUPERFAMILY Chaperone J-domain 159 222 IPR036869 -
Gso4g0419 226 CDD DnaJ 161 215 IPR001623 -
Gso4g0419 226 Coils Coil 69 96 - -
Gso4g0419 226 Pfam DnaJ domain 161 222 IPR001623 -
Gso4g0419 226 Gene3D DnaJ domain 153 226 IPR036869 -
Gso4g0419 226 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 224 - -
Gso4g0419 226 SMART dnaj_3 159 222 IPR001623 -
Gso4g0419 226 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0419 Gso-Chr4 3884563 3892782 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0419 - - gmx:100812371 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0419 4 3884563 3892782 Gso6g0401 6 3726100 3731596 GST
Gso14g0802 14 8624033 8634322 Gso4g0419 4 3884563 3892782 PCT
Gso4g0419 4 3884563 3892782 Gso14g0802 14 8624033 8634322 PCT