Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0399 ATGGCACCACCGTTGTTCAATTGGGGGGTGAAGGACACTCACAGGGGAACCCCTGTGGTGGTGAAAATGGAGAACCCAAATTGGTCGATGGTGGAACTTGAGGGTCCCGAAGAAGAAGACTTAATGCTTACAAATTCTCCTTCTTCGGGCGTTTCAAGAGACAAAGGAAGGGGCAAAAACGCCAAACAGCTCACGTGGGTTCTGCTCCTTAAAGCGCACCGCGCCGCGGGTTGCTTGACCTCCATCGCGCCGGCATTGTTGGGCTTCGTCGCCGCCGTGAAGCGCCGCGTCGCTGCCGGAAAAACCGACGCCGACACCGACACCGACGGCGGCAGGGAGAACGAGAACCCCGCCGTGAAGACGCGGTTCTATTCCTGCATCAAGCTCTTCCTCTGCCTCTCCGTGTTCCTCTTGGTTTTCGAAATCGTCGCGTACTTCAAAGGGTGGTACTTCAGCGCGGCGAGGTTTCAGTTGGAGCATTTTATGTGGACACCGTCGTTTGGAGTAAAGGGTTTCTTCGATTGGCTCTACGCTAGGTGGGTTTTCGTTCGCGTGGAGTATCTCGCTCCTCCTCTGCAGTTCTTGACCAATGCGTGTATCGTGCTTTTCCTTATCCAGAGTATGGATAGGCTTGCTCTCTGTTTGGGGTGCTTCTGGATCCGGTTTAAGAAGATCAAGCCTGTCCCCAAAGGTGGCGGTGTGTTAGATCTTGAATCTGGAGAAGAAAAAGGTTTCTCTTTTTCCCCAATGGTGCTCGTGCAGATCCCCATGTGCAATGAGAAAGAGGTTTATCAGCAATCGATTGCGGCGGTATGTAATTTGGATTGGCCGAAGGGGAAGTTGTTGATTCAGGTTTTGGATGATTCAGATGACCCAGCGACGCAGTCGTTGATAAAGGAGGAGGTGCAAAAATGGCAGCAAGAGGGTGCCAATATTTTGTACCGGCATCGCGTGATTAGAGATGGGTACAAGGCTGGGAATTTGAAATCCGCCATGAATTGTAGCTACGTTAAAGACTACGAGTTTGTTGCAATTTTTGATGCAGATTTTCAGCCTACCCCGGATTTTCTCAAGAAAACCGTTCCTCATTTTAAGGATAATGATGATTTGGGGCTTGTTCAAGCGAGATGGTCATTTGTAAACAGGGATGAGAACCTGCTAACGAGGTTGCAGAACATTAACCTGTCTTTTCATTTTGAGGTGGAGCAGCAAGTCAATGGGATTTTCATTAACTTTTTCGGATTCAATGGAACCGCCGGTGTGTGGAGGATTAAGACTTTGGAGGATGCTGGGGGTTGGTTGGAAAGGACTACTGTTGAGGACATGGACATTGCCGTTCGAGCTCATCTTCACGGCTGGAAATTCATTTTCCTCAACGATGTTGAGTGCCAATGCGAGCTACCAGAATCTTACGAAGCTTACAGGAAACAGCAGCATAGATGGCATTCTGGGCCAATGCAACTGTTCCGCTTGTGTTTGCCTGATATCATCAGGGCCAAGATAAGTGTGTGGAAGAAATTCAACATGATATTCCTCTTCTTCCTTCTTAGAAAGCTGATATTGCCATTCTATTCATTCACCTTGTTTTGTATAATCCTGCCTATGACAATGTTTGTGCCAGAGGCCGAGCTTCCTGCGTGGGTTGTGTGTTACATCCCTGCTGCCATGTCTTTTCTCAACATTCTTCCAGCTCCAAAGGCCTTCCCTTTTATTGTCCCTTATCTCCTATTTGAGAACACCATGTCAGTTACCAAATTCAATGCCATGATCTCAGGCTTATTCCAGCTTGGTAGTGCATACGAGTGGGTGGTCACTAAGAAATCCGGTCGTTCCTCGGAGGGTGATTTGGTTTCATTGATTGAGAAAGGACCAAAGCATCAAAGAGGGTCCTCAGCACCTGATCTAGAGGAACTTCGGAAGCAGGAGCAGCAAAAGGCCTCTAAGAAGAAGAAAAAACATAACAGAATATATATGAAGGAGCTTGCTTTGGCTTTTCTTCTTCTAACAGCCTCAGCAAGGAGTCTTCTCTCTGCTCAAGGGATCCACTTCTACTTTTTGTTATTCCAGGGAATATCATTCCTGTTGGTTGGTCTGGACTTGATTGGTGAGCAGGTGGATTGA 2121 0.4785 MAPPLFNWGVKDTHRGTPVVVKMENPNWSMVELEGPEEEDLMLTNSPSSGVSRDKGRGKNAKQLTWVLLLKAHRAAGCLTSIAPALLGFVAAVKRRVAAGKTDADTDTDGGRENENPAVKTRFYSCIKLFLCLSVFLLVFEIVAYFKGWYFSAARFQLEHFMWTPSFGVKGFFDWLYARWVFVRVEYLAPPLQFLTNACIVLFLIQSMDRLALCLGCFWIRFKKIKPVPKGGGVLDLESGEEKGFSFSPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKGKLLIQVLDDSDDPATQSLIKEEVQKWQQEGANILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKKTVPHFKDNDDLGLVQARWSFVNRDENLLTRLQNINLSFHFEVEQQVNGIFINFFGFNGTAGVWRIKTLEDAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKISVWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPAAMSFLNILPAPKAFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLIEKGPKHQRGSSAPDLEELRKQEQQKASKKKKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVD* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0399 706 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 245 466 IPR029044 -
Gso6g0399 706 SUPERFAMILY Nucleotide-diphospho-sugar transferases 251 527 IPR029044 -
Gso6g0399 706 MobiDBLite consensus disorder prediction 624 644 - -
Gso6g0399 706 PANTHER - 11 705 - -
Gso6g0399 706 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 11 705 - -
Gso6g0399 706 Pfam Glycosyl transferase family group 2 343 548 IPR001173 -
Gso6g0399 706 MobiDBLite consensus disorder prediction 624 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0399 Gso-Chr6 3707343 3710846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0399 4 706 Miscellaneous Gene Families AT4G07960 76.611 0.0 1072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0399 - - gmx:100818436 1358.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0418 4 3870508 3874488 Gso6g0399 6 3707343 3710846 GST