Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0418 ATGGCACCACCGTTGTTCAATTGGGGGGTGAAGGACACTCACAGGGGAACCCCTGTGGTGGTGAAGATGGAGAACCCAAATTGGTCGATGGTGGAACTCGAGGGTCCCGAAGAAGAAGACTTAATGCTAACAAATTCACCTTCTTCGGGCGTTTCAAGAGACAAAGGGAGGGGCAAAAATGCCAAACAGCTCACGTGGGTTCTCCTCCTCAAAGCGCACCGCGCCGCGGGTTGCTTAACCTCCCTCGCCCCGGCATTGGTGGGCCTCGTCGCCGCCGTGAAGCGCCGCGTCGCCGCCGGAAAAACCGACGCCGACACCGGCGGAGGCAGGGAGAACGAAAACCCCGCCGTGAAGACGCGCTTCTATTCCTGCATCAAGCTCTTCCTCTGCCTCTCCGTGGTCCTCTTGGTTTTCGAAATCGCCGCGTACTTCGAAGGGTGGTATTTCGGCGCGGCGAGGTTTCAGCTGGAGCATTTGCTGTGGGCACCGTCCTTCGGAGTTAAGGGTTTCTTCGATTGGCTCTACGCAAGGTGGGTTTTCGTTCGCGTGGAGTATCTCGCTCCTCCTCTGCAGTTCTTGACCAATGCGTGCATCGTGCTCTTCCTTATCCAGAGTATGGATAGGCTTGTTCTCTGTTTGGGGTGTTTCTGGATCCGGTTTAAGAAGATCAAGCCTGTCCCCAAAGGTGGGGGTGTCGTAGATCTTGAATCTGGAGAAGAAAAGGGTTTCTCTTTTTCCCCAATGGTGCTCGTGCAGATCCCCATGTGCAATGAGAAAGAGGTTTATCAGCAGTCGATTGCGGCGGTGTGTAATTTGGATTGGCCGAAGGGGAAGTTGTTGATTCAGGTTTTGGATGATTCGGATGACCCAACGACGCAGTCGTTGATAAAGGAGGAGGTGCAAAAGTGGCAGCAAGAGGGTGCCAACATTTTGTACCGGCATCGTGTGATTAGAGATGGGTACAAGGCTGGGAATTTGAAATCCGCCATGAATTGTAGCTACTTGAAAGACTACGAGTTTGTTGCAATTTTTGATGCAGATTTTCAGCCTACCCCGGATTTTCTCAAGAAAACCGTTCCTCATTTTAAGGATAATGATGATTTGGGGCTTGTTCAAGCGAGATGGTCATTTGTGAACAGGGATGAGAACCTGCTAACGAGGCTGCAGAACATTAACCTGTCTTTTCATTTTGAGGTGGAGCAGCAAGTCAATGGGATTTTCATTAACTTTTTTGGGTTCAATGGAACCGCGGGAGTGTGGAGGATCAAGACTTTGGAGGATGCCGGTGGTTGGTTGGAGAGGACAACTGTTGAGGACATGGACATTGCCGTCCGAGCTCATCTTCACGGTTGGAAGTTCATTTTCCTCAACGATGTTGAGTGCCAATGCGAGCTACCAGAATCTTATGAAGCTTACAGGAAACAGCAGCATAGATGGCATTCTGGGCCAATGCAACTGTTCCGTCTTTGTTTGCCTGATATCATCAGGGCCAAGATAAGTGTGTGGAAGAAATTCAACATGATATTCCTCTTCTTCCTTCTTAGAAAGCTGATATTGCCATTCTATTCATTCACCTTGTTTTGTATAATCCTGCCTATGACAATGTTCGTGCCGGAGGCCGAGCTTCCTGCGTGGGTTGTGTGTTACATCCCTGCTGCCATGTCTTTTCTCAACATTCTTCCAGCTCCAAAAGCCTTCCCCTTTATCGTCCCTTATCTCTTATTTGAGAACACCATGTCAGTTACCAAATTCAACGCCATGATCTCGGGCTTATTCCAGCTTGGTAGTGCATACGAGTGGGTGGTCACCAAGAAATCTGGTCGTTCCTCGGAGGGCGATTTGGTTTCATTGATTGAGAAAGGACCAAAGCATCAAAGAGGGTCCTCAGCACCTGATCTAGAGGAAATGAAAGAGGAACTTCGAAAGCAGGAGCAGCAAAAGGCCTCTAAGAAGAAGAAAAAACATAACAGAATATATATGAAGGAGCTTGCTTTGGCTTTTCTTCTTCTAACAGCCTCAGCAAGGAGTCTTCTCTCTGCTCAAGGGATTCACTTCTACTTTTTGTTATTCCAGGGAATATCATTCTTGTTGGTTGGTCTAGACTTGATTGGTGAACAGGTGGACTGA 2127 0.4875 MAPPLFNWGVKDTHRGTPVVVKMENPNWSMVELEGPEEEDLMLTNSPSSGVSRDKGRGKNAKQLTWVLLLKAHRAAGCLTSLAPALVGLVAAVKRRVAAGKTDADTGGGRENENPAVKTRFYSCIKLFLCLSVVLLVFEIAAYFEGWYFGAARFQLEHLLWAPSFGVKGFFDWLYARWVFVRVEYLAPPLQFLTNACIVLFLIQSMDRLVLCLGCFWIRFKKIKPVPKGGGVVDLESGEEKGFSFSPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKGKLLIQVLDDSDDPTTQSLIKEEVQKWQQEGANILYRHRVIRDGYKAGNLKSAMNCSYLKDYEFVAIFDADFQPTPDFLKKTVPHFKDNDDLGLVQARWSFVNRDENLLTRLQNINLSFHFEVEQQVNGIFINFFGFNGTAGVWRIKTLEDAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKISVWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPAAMSFLNILPAPKAFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLIEKGPKHQRGSSAPDLEEMKEELRKQEQQKASKKKKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVD* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0418 708 MobiDBLite consensus disorder prediction 622 646 - -
Gso4g0418 708 Pfam Glycosyl transferase family group 2 341 546 IPR001173 -
Gso4g0418 708 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 11 707 - -
Gso4g0418 708 SUPERFAMILY Nucleotide-diphospho-sugar transferases 249 525 IPR029044 -
Gso4g0418 708 Coils Coil 633 653 - -
Gso4g0418 708 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 243 464 IPR029044 -
Gso4g0418 708 PANTHER - 11 707 - -
Gso4g0418 708 MobiDBLite consensus disorder prediction 622 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0418 Gso-Chr4 3870508 3874488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0418 4 708 Miscellaneous Gene Families AT4G07960 76.323 0.0 1077
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0418 - - gmx:100805969 1353.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0418 4 3870508 3874488 Gso4g0418 4 3870508 3874488 ECH
Gso4g0418 4 3870508 3874488 Gso6g0399 6 3707343 3710846 GST