Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0259 ATGGGCGAACAGACGCTAGGTCAAGCACAACCCCTCCCCGCCCCCGATGCTGCCACGGCCCACTCCGAACTAAACAATGTCCCTCAGCCGACAACCTCCCCAGCTACGAAAATCCCCCTCCGTCCCCGCAAGATCCGGAAGGTCTCTCCGGACCCCTCCACCTCCGAAGCCCCCATCAAACCCGCCAAACCTGTTGGCCGCAACACCACCTCCAAGGCTGCTCCGCCTCGAGCCCTGACTGTGGTCCCTCGCATAGTGGCTCGCTCACTCTCCTGCGACGGCGAGGTCGAGATCTCGCTCCGCTACCTCCGCAACGCGGACCCCCTCCTCTCCCCTCTGATCGACATTCACCAACCCCCAACCTTCGACAATTTCCACACTCCCTTCCTCGCCCTAACCCGCAGCATCTTGTACCAGCAACTCGCGTTCAAAGCCGGCACCTCCATCTACACGCGCTTCATCGGCCTCTGCGGCGGCGAAAACGGCGTCGTTCCCGAAACAGTTCTCGCCCTTACTCCCCAACAGCTTCGGCAGATTGGGGTTTCGGGGCGGAAGGCCAGTTACCTTCACGATTTGGCCAGGAAGTACCAGAACGGGATACTCTCCGATTCCGCCATTGTGAACATGGATGACAAGTCGCTCTTCACCATGCTTACCATGGTCAATGGCATTGGCTCTTGGTCTGTTCACATGTTCATGATTTTCTCACTCCACAGACCCGATGTTCTCCCCATCAATGACCTTGGTGTCAGGAAAGGGGTTCAGCTTCTCTACAACCTCGAGGACTTGCCGCGGCCCTCGCAGATGGACCAGTTGTGTGACAAGTGGAGGCCTTATCGGTCTGTTGCTTCGTGGTATATGTGGAGATTTGTTGAAGCCAAGGGAACTCCTTCGAGTGCGGTGACGGTAGCGACTGGTGCCGGCTTGCAGCAGCAGCGCCATCACCAGCATCAACAACAGGAGCAACAGCAGCAGCAACACCCTCCACAGCCACAGCTTCTGGATCCCATAAATAGCATGTTTAATCTTGGGGCTGCCTGTGCTTGGGGACAATGA 1056 0.5786 MGEQTLGQAQPLPAPDAATAHSELNNVPQPTTSPATKIPLRPRKIRKVSPDPSTSEAPIKPAKPVGRNTTSKAAPPRALTVVPRIVARSLSCDGEVEISLRYLRNADPLLSPLIDIHQPPTFDNFHTPFLALTRSILYQQLAFKAGTSIYTRFIGLCGGENGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEDLPRPSQMDQLCDKWRPYRSVASWYMWRFVEAKGTPSSAVTVATGAGLQQQRHHQHQQQEQQQQQHPPQPQLLDPINSMFNLGAACAWGQ* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0259 351 Gene3D - 102 289 - -
Gso6g0259 351 CDD ENDO3c 129 290 IPR003265 GO:0006284
Gso6g0259 351 MobiDBLite consensus disorder prediction 1 74 - -
Gso6g0259 351 Pfam HhH-GPD superfamily base excision DNA repair protein 134 276 IPR003265 GO:0006284
Gso6g0259 351 MobiDBLite consensus disorder prediction 308 335 - -
Gso6g0259 351 Gene3D Hypothetical protein; domain 2 126 239 - -
Gso6g0259 351 MobiDBLite consensus disorder prediction 22 36 - -
Gso6g0259 351 PANTHER BNAC05G15000D PROTEIN 23 345 - -
Gso6g0259 351 SUPERFAMILY DNA-glycosylase 118 290 IPR011257 GO:0003824|GO:0006281
Gso6g0259 351 SMART endo3end 137 292 IPR003265 GO:0006284
Gso6g0259 351 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 23 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0259 Gso-Chr6 2442117 2446709 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0259 K01247 - gmx:100788160 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0279 4 2511703 2516469 Gso6g0259 6 2442117 2446709 GST