Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0279 ATGGGCGAACAGACGCTAGGTCAAGCACAATCCCTAATCGAACCTCAACCTCTCCCCGCCCCCTCCTCAACTGCCGTCCCCGACGGTGCCACGGTGGACTCCGAACTAAACAATGTCCCTCGGCCGACAACATCCCCAGCCACGAAAATCCCCCTCCGTCCCCGCAAGATCCGGAAGGTCTCTCCGGACCCCTCCACCTCCGAATCCCAAACCGAAACCCCCAAACCCGCCAAAACCGGGGGCCGCAACACCACCAAGGCTGCTCCGCCGCGAGCCCTTACGGTGGTCCCTCGTATAGTGGCGCGCTCACTCTCCTGCGACGGTGAAGTCGAGATCGCGCTCCGGTACCTCCGCAACGCGGACCCAGTCCTCTCCCCTCTCATCGACATTCACCAACCCCCAACCTTCGACAATTTCCACACTCCCTTCCTCGCCCTAACCCGCAGCATCTTGTACCAGCAACTCGCGTACAAAGCCGGCACCTCCATCTACACGCGCTTCATCGCGCTCTGCGGGGGCGAAAACGGTGTCGTTCCCGAAACCGTTCTCGCCCTAACACCCCAACAGCTTCGCCAGATTGGGGTTTCTGGGCGGAAGGCGAGTTACCTTCATGATTTGGCGAGGAAGTATCAGAACGGGATACTCTCCGATTCCGCCATTGTGAACATGGATGATAAGTCGCTCTTTACCATGCTCACCATGGTCAATGGCATTGGCTCTTGGTCTGTTCACATGTTCATGATTTTCTCACTCCACAGACCCGATGTTCTCCCCATCAATGACCTTGGCGTCAGGAAAGGAGTTCAGCTTCTCTACAACCTCGAGGACTTACCCCGGCCCTCGCAGATGGACCAGTTGTGTGACAAGTGGAGGCCTTACCGGTCCGTTGCTTCGTGGTACATGTGGAGATTTGTTGAAGCCAAGGGAACTCCTTCGAGTGCGGTGGCGGTAGCGACCGGTGCTGGCTTGCAGCAGCAGCAGCACCACCAGCACCATCACCAGCACCAACAACAGGAACAACAACAGCAGCAGCAGCAGCAACAGCAGCATCCTCCACAGCCACAGCTTCTGGATCCCATCAATAGCATGTTTAATCTCGGGGCCGCCTGTGCTTGGGGACAATGA 1125 0.5787 MGEQTLGQAQSLIEPQPLPAPSSTAVPDGATVDSELNNVPRPTTSPATKIPLRPRKIRKVSPDPSTSESQTETPKPAKTGGRNTTKAAPPRALTVVPRIVARSLSCDGEVEIALRYLRNADPVLSPLIDIHQPPTFDNFHTPFLALTRSILYQQLAYKAGTSIYTRFIALCGGENGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEDLPRPSQMDQLCDKWRPYRSVASWYMWRFVEAKGTPSSAVAVATGAGLQQQQHHQHHHQHQQQEQQQQQQQQQQHPPQPQLLDPINSMFNLGAACAWGQ* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0279 374 MobiDBLite consensus disorder prediction 27 45 - -
Gso4g0279 374 MobiDBLite consensus disorder prediction 317 360 - -
Gso4g0279 374 SUPERFAMILY DNA-glycosylase 132 304 IPR011257 GO:0003824|GO:0006281
Gso4g0279 374 SMART endo3end 151 306 IPR003265 GO:0006284
Gso4g0279 374 Gene3D - 116 303 - -
Gso4g0279 374 MobiDBLite consensus disorder prediction 337 360 - -
Gso4g0279 374 MobiDBLite consensus disorder prediction 1 18 - -
Gso4g0279 374 CDD ENDO3c 143 304 IPR003265 GO:0006284
Gso4g0279 374 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 34 368 - -
Gso4g0279 374 Gene3D Hypothetical protein; domain 2 140 253 - -
Gso4g0279 374 MobiDBLite consensus disorder prediction 1 90 - -
Gso4g0279 374 PANTHER BNAC05G15000D PROTEIN 34 368 - -
Gso4g0279 374 MobiDBLite consensus disorder prediction 63 80 - -
Gso4g0279 374 Pfam HhH-GPD superfamily base excision DNA repair protein 148 290 IPR003265 GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0279 Gso-Chr4 2511703 2516469 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0279 K01247 - gmx:100790760 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0279 4 2511703 2516469 Gso4g0279 4 2511703 2516469 ECH
Gso4g0279 4 2511703 2516469 Gso6g0259 6 2442117 2446709 GST