Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0236 ATGGCGAAGCATTCGGTGGCAATGGCGAAGAAGCGGTGGCCGATAATGTTGGCGGCATTCTTGTCCGTCTCAACAGTGACGGTGCTCTTAATGAGATCCAACAACTCCGATTCCTGCAACACCAACCATTTTACTGTTGCACAAGATAATCAGATTCGTTCCCCTGTCCAACTCACAAATGCGGCTTCCAGTCCCCTAATTTTCATGAAGTCCAAGCTAGTTCTCATGGTTTCGCACGAGCTTTCTCTTTCAGGCGGGCCTTTGCTGCTGATGGAGTTGGCGTTTCTGCTGAGAGGCGTTGGTTCTGACGTTGTTTGGATTTCTAATCAGAAACCTTCGGAACATGATCGGGTCGTTTACAGCTTGGAAAGTAAGATGTTGGACAGAGGAGTGCAGGTCCTGTCTGCCAAAGGTGAAAATGCTATAGATACAGCTCTTAAAGCAGATATGGTCATTCTAAATACTGCCGTAGCTGGGAAGTGGCTGGATGCCATTCTCAAGGAAAAAGTTGCCCATGTTCTTCCAAAGGTTTTATGGTGGATTCATGAAATGCGAGGGCATTATTTCAAAGTGGAATATGTTAAGCACCTCCCTTTTGTTGCAGGTGCCATGATTGATTCTCATACAACTGCAGAGTACTGGAAGAATAGGACTAGGGAGCGTTTAGGGATTGAAATGCCTGAAACATATGTTGTACATCTTGGAAATAGCAAGGAGCTTATGGAAGTTGCAGAAGATAGTGTAGCAAAGAGAGTTCTTCGTGAGCATGTTCGGGAATCTCTTGGAGTGAGAAATGATGATCTACTTTTTGCCATCATAAATAGTGTTTCTCGTGGTAAAGGGCAGGATCTATTTCTTCGCTCCTTTTATGAAAGTTTGCAACTCATTCAGGAGAAGAAACTCCAGTTGCCATTTTTGCATGCTGTGATAGTAGGGAGTGATATGAATGCTCAGACAAAGTTTGAAATGGAACTTCGCAAATTTGTTGTTGAGAAAAAGATTCAGAATCGTGTTCACTTTGTTAACAAAACCCTGGCTGTGGCTCCTTACCTGGCTGCTATTGATGTTCTTGTTCAAAATTCTCAGGCACGGGGAGAATGTTTTGGAAGGATAACCATTGAAGCAATGGCATTTCGGCTGCCTGTACTGGGAACTGCAGCTGGAGGCACGATGGAGATTGTGGTGAATGGGACAACCGGTTTGCTGCATCCTGTCGGGAAAGAAGGCGTGACACCTCTCGCCAAGAACATTGTGAAATTGGCAAGTCATGTTGAGAAGAGGCTAACAATGGGAAAGAAAGGGTATGAAAGAGTGAAGGAGAGATTCCTGGAGCACCATATGTCGCAGAGAATTGCATTGGTTCTGAAGGAAGTTTTACAGAAGGCTAAGCAATAG 1395 0.4459 MAKHSVAMAKKRWPIMLAAFLSVSTVTVLLMRSNNSDSCNTNHFTVAQDNQIRSPVQLTNAASSPLIFMKSKLVLMVSHELSLSGGPLLLMELAFLLRGVGSDVVWISNQKPSEHDRVVYSLESKMLDRGVQVLSAKGENAIDTALKADMVILNTAVAGKWLDAILKEKVAHVLPKVLWWIHEMRGHYFKVEYVKHLPFVAGAMIDSHTTAEYWKNRTRERLGIEMPETYVVHLGNSKELMEVAEDSVAKRVLREHVRESLGVRNDDLLFAIINSVSRGKGQDLFLRSFYESLQLIQEKKLQLPFLHAVIVGSDMNAQTKFEMELRKFVVEKKIQNRVHFVNKTLAVAPYLAAIDVLVQNSQARGECFGRITIEAMAFRLPVLGTAAGGTMEIVVNGTTGLLHPVGKEGVTPLAKNIVKLASHVEKRLTMGKKGYERVKERFLEHHMSQRIALVLKEVLQKAKQ* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0236 464 Gene3D Glycogen Phosphorylase B; 243 442 - -
Gso6g0236 464 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 1 464 - -
Gso6g0236 464 PANTHER GLYCOSYLTRANSFERASE 1 464 - -
Gso6g0236 464 Pfam Glycosyl transferases group 1 257 437 IPR001296 GO:0016757
Gso6g0236 464 Pfam Glycosyl-transferase family 4 70 249 IPR041693 -
Gso6g0236 464 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 69 460 - -
Gso6g0236 464 CDD GT4_PimA-like 101 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0236 Gso-Chr6 2281992 2288030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0236 1 463 Glycosyltransferase AT1G19710 74.468 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0236 - - gmx:100791337 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0257 4 2359311 2363845 Gso6g0236 6 2281992 2288030 GST