Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0257 ATGGCGAAGCATTCGGTGGCAATGGCGAAGAAGCGGTGGCTGATAATGTTGGCGGCATTCCTGTCCGTCTCAACAGTGACGGTGCTCTTAATGAGATCCAACAACTCCGATTCCTGCAACACCAACCATTTTACTATTGCACAAGATAATAACCAGATTCGTTCCCCTGTCCAACTCACTAATGCCGCTTCCAGCCCCCTTAATTTCATGAAGTCCAAGCTAGTTCTCATGGTTTCGCATGAGCTTTCTCTTTCAGGAGGGCCTTTGCTTCTGATGGAGTTGGCGTTTCTGTTGAGAGGCGTTGGTTCCGATGTCGTTTGGATCACTAATCAGAAACCTTCGGAACATGATCAGGTTATTTACAGTTTGGAAAGCAAGATGTTAGACAGAGGAGTGCAGGTCCTGTCTGCCAAAGGTGAAAAGGCTATAGATACAGCTCTCAAAGCAGATATGGTCATTCTAAATACTGCTGTAGCTGGGAAGTGGCTGGATGCCGTTCTCAAGGAAAAAGTTGCCCATGTTCTTCCAAAGGTTTTATGGTGGATTCATGAAATGCGAGGGCATTATTTCAAAGTGGAATATGTTAAGCACCTCCCTTTTGTTGCAGGTGCCATGATTGATTCACATACAACTGCAGAGTACTGGAAGAATAGGACTAGGGAGCGTTTAGGGATTAAAATGCCTGAAACTTTTGTTGTACATCTTGGAAATAGCAAGGAGCTTATGGAAGTTGCAGAAGATAGTGTGGCAAAGAGAGTTCTTCGTGAGCATGTTCGGGAATCTCTTGGAGTGAGAAATGATGATCTACTTTTTGCCATCATAAATAGTGTTTCTCGTGGTAAAGGGCAGGATCTATTTCTTCACTCCTTTTATGAAAGTTTGCAACTCATTCAGGAGAAGAAACTCCAGTTGCCATCTTTGCATGCTGTGGTAGTAGGGAGTGATATGAATGCTCAGACAAAGTTTGAAATGGAACTTCGCAAATTTGTTGTTGAAAAAAAGATTCAGAATCATGTTCACTTTGTTAACAAAACCCTGGCTGTGGCTCCTTACCTGGCTGCTGTTGATGTTCTTGTTCAGAATTCTCAGGCACGGGGAGAATGTTTTGGAAGGATAACCATTGAAGCAATGGCATTTCGGCTGCCTGTACTGGGAACTGCTGCTGGAGGCACGATGGAGATTGTGGTGAATGGGACAACCGGTTTGCTGCATCCTGTTGGGAAAGAAGGCGTGACACCTCTCGCGGAGAACATTGTGAAATTGGCTAGTCATGTTGAGAAGAGGCTAACAATGGGAAAGAAAGGGTATGAAAGAGTGAAGGAGAGGTTTCTGGAGCACCATATGTCGCAGAGAATTGCATTGGTTCTGAAGGAAGTTTTACAGAAGGCTAGGCAATAG 1398 0.4442 MAKHSVAMAKKRWLIMLAAFLSVSTVTVLLMRSNNSDSCNTNHFTIAQDNNQIRSPVQLTNAASSPLNFMKSKLVLMVSHELSLSGGPLLLMELAFLLRGVGSDVVWITNQKPSEHDQVIYSLESKMLDRGVQVLSAKGEKAIDTALKADMVILNTAVAGKWLDAVLKEKVAHVLPKVLWWIHEMRGHYFKVEYVKHLPFVAGAMIDSHTTAEYWKNRTRERLGIKMPETFVVHLGNSKELMEVAEDSVAKRVLREHVRESLGVRNDDLLFAIINSVSRGKGQDLFLHSFYESLQLIQEKKLQLPSLHAVVVGSDMNAQTKFEMELRKFVVEKKIQNHVHFVNKTLAVAPYLAAVDVLVQNSQARGECFGRITIEAMAFRLPVLGTAAGGTMEIVVNGTTGLLHPVGKEGVTPLAENIVKLASHVEKRLTMGKKGYERVKERFLEHHMSQRIALVLKEVLQKARQ* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0257 465 Pfam Glycosyl-transferase family 4 71 250 IPR041693 -
Gso4g0257 465 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 1 464 - -
Gso4g0257 465 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 70 461 - -
Gso4g0257 465 CDD GT4_PimA-like 102 457 - -
Gso4g0257 465 Gene3D Glycogen Phosphorylase B; 244 443 - -
Gso4g0257 465 PANTHER GLYCOSYLTRANSFERASE 1 464 - -
Gso4g0257 465 Pfam Glycosyl transferases group 1 258 438 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0257 Gso-Chr4 2359311 2363845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0257 28 464 Glycosyltransferase AT1G75420 77.574 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0257 - - gmx:100791337 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0257 4 2359311 2363845 Gso4g0257 4 2359311 2363845 ECH
Gso4g0257 4 2359311 2363845 Gso6g0236 6 2281992 2288030 GST