Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0171 ATGAAGGATGGAGCCCAAGTTGTGCTGAATGATAATGGTAACTACGGCAAATTCTCACACCTACTTGCTTCCCAAGATCGTGATTATCTTCTCTCTCCAACTGGGGCTCAGGTGAAAGTTTCTGATCTTGAAGGGAGAGTAGTGGGTCTATTATTCGCTGCGAATTGGTACCCACCATGCCGTGGATTCACCCAAATCCTAGTTGGAATCTACGAGGAGCTGAAAAGCAGAGTCCCTCAATTGGAGATTGTGTATGTGTCCTCTGATGAAAACTTGGATGCCTTTAATAGCTTCTATGGAAACATGCCGTGGCTTGCAATTCCGTTCTCCGATTTGGAAACAAAGAAATCCTTGACCAGAAAGTACGACGTGGAAGCCGTTCCGTGCTTAATTTTGTTGCAACCTGATGATCGTAAAGAGCACGTAACAGTTCGTGACGGGGTTGAACTTATTTACCGTTACGGAATCCAAGCTTATCCATTCAGTAACGAGAGGTTGGAGCAGCTGCAAAAGGAAGACAAAGTGAAGCGTGATAATCAGACTCTCACTAATTTACTAGCAAACCACCATAGAGACTATGTTTTGAGTCACACTCACACGGGACTCAAAAAGGTACCTGTTGCTTGGCTAGTGGGTAAAACAATTGGACTCTACTTCTCAGCGGAATGGTGCGTCCCATGCGCCAAGTTCACTCCAAAACTGATTTCTGTTTACGAGAAGATAAAGCACGAGCTAGCCGGAAAGGGAGAGGAAGACTTCGAAGTTGTGCTAATATCCAGCGACCGCGACCAAGCATCCTTTGACTCCTACTACAGCACCATGCCTTGGTTAGCCTTACCTTTCGGTGACCCAGAAATCAAGAACCTCGTTAGACACTACAACGTGCAAGGGATTCCCTGGTTGGTGATCATAGGCCCTGATGGTAAAACAATAACCGTACATGGCAGGAGTTTGATAAACTTGTACCAAGAAAATGCGTACCCTTTCACCAACGCCAAAGTGGAGGAGCTGGAGAAACAGCTTGAGGAAGAGGCCAAGGGTCTTCCGGCATTGGTGTATCATGAAGGGCACCGCCATGATCTGAATTTGGTGTCTGATGGAAACGGTGGAGGGCCCTTTATTTGCTGCGTATGTGATGAGCAAGGGTCTAGTTGGGCCTACCAGTGTCTCCAATGTGGCTATGAAGTGCACCCAAAGTGCGTCAGAACTGTGGAACGTCATGACAATAATGTCTAG 1236 0.4668 MKDGAQVVLNDNGNYGKFSHLLASQDRDYLLSPTGAQVKVSDLEGRVVGLLFAANWYPPCRGFTQILVGIYEELKSRVPQLEIVYVSSDENLDAFNSFYGNMPWLAIPFSDLETKKSLTRKYDVEAVPCLILLQPDDRKEHVTVRDGVELIYRYGIQAYPFSNERLEQLQKEDKVKRDNQTLTNLLANHHRDYVLSHTHTGLKKVPVAWLVGKTIGLYFSAEWCVPCAKFTPKLISVYEKIKHELAGKGEEDFEVVLISSDRDQASFDSYYSTMPWLALPFGDPEIKNLVRHYNVQGIPWLVIIGPDGKTITVHGRSLINLYQENAYPFTNAKVEELEKQLEEEAKGLPALVYHEGHRHDLNLVSDGNGGGPFICCVCDEQGSSWAYQCLQCGYEVHPKCVRTVERHDNNV* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0171 411 SUPERFAMILY Cysteine-rich domain 347 402 IPR046349 -
Gso6g0171 411 SUPERFAMILY Thioredoxin-like 193 314 IPR036249 -
Gso6g0171 411 Pfam C1 domain 356 401 IPR004146 -
Gso6g0171 411 Pfam Thioredoxin-like 45 136 IPR012336 -
Gso6g0171 411 Pfam Thioredoxin-like 212 309 IPR012336 -
Gso6g0171 411 ProSiteProfiles Thioredoxin domain profile. 152 346 IPR013766 -
Gso6g0171 411 PANTHER THIOREDOXIN 17 400 - -
Gso6g0171 411 SUPERFAMILY Thioredoxin-like 30 143 IPR036249 -
Gso6g0171 411 Gene3D Glutaredoxin 191 331 - -
Gso6g0171 411 Gene3D Glutaredoxin 21 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0171 Gso-Chr6 1600209 1607385 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0171 K17609 - gmx:100808125 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0188 4 1655402 1661909 Gso6g0171 6 1600209 1607385 GST