Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0188 ATGAAAGCGGAGATGAAGGATGGAGCTCCTCAAGTTGTGATGAATCATAATGGTAACCACGGCAAATTCTCACACCTACTTGCTTCCCAAGATCGTGACTATCTTCTCTCTCCAACTGGGGCTCAGGTGAAAGTTTCTGATCTTGAAGGGAAAGTAGTGGGTCTATTATTCGCTGCGAATTGGTACCCACCTTGCCGTGGATTCACCCAAGTCCTAGCTGGAATCTACGAGGAGCTAAAAAGCAGAGTCCCTCAATTTGAGATTGTGTATGTGTCCTCAGATGAGGACTTGAATGCCTTTAATAGCTTCTATGGAAGCATGCCCTGGATTGCAATTCCGTTCTCTGATTTGGAAACAAAGAAGTCTTTGACCAGAAAGTTTGACGTGGAAGCCGTTCCATGCTTAATTTTGTTGCAACCTGACGATCGTAAAGAGCACGCAACAGTTCGTGATGGGGTTGAACTTATTTACCGCTATGGAATCCAAGCTTATCCATTCAGTAAGGACAGGTTGGAGCAGCTGCAAAAGGAAGACAAAGTGAAGCGTGATAACCAGACTCTCACTAATTTACTAGCAAACCACCATAGAGACTACGTTTTGAGTCACACTCACACGGGACTCAAAAAGGTACCTGTAGCTTCCCTAGTGGGTAAAACAATTGGACTCTACTTCTCAGCGGAATGGTGCGTCCCATGCGCCAAGTTCACTCCCAAGCTGATTTCCGTTTACGAGAAGATAAAGCACGAGCTAGCCGAAAAGGGAGAGGAGGACTTCGAAGTTGTGCTAATATCCAGCGACCGCGACCAAGCATCCTTTGACTCCTACTACAGCACCATGCCTTGGTTGGCCTTGCCTTTCGGTGACCCAGAGATCAAGAACCTCGTTAGACACTACAACGTGCAAGGAATTCCTTGGTTGGTGATTATAGGTCCTGATGGTAAAACAATAACCGTACACGGGAGGAGTTTGATAAACTTGTACCAAGAGAATGCGTACCCTTTCACCAAGGCCAAAGTGGAGGAGCTGGAGAAACAGCTGGAGGAAGAGGCCAAGGGTCTTCCAGCATTGGTGTATCACCAAGGGCATCGACATGATCTGAATTTGGTGTCTGATGGAAATGGTGGAGGGCCCTTTATCTGCTGCGTGTGTGATGAACAAGGGTCTAGCTGGGCCTACCAGTGTCTCCAATGTGGCTATGAAGTGCACCCAAAGTGCGTCAGAACTGTGGAACGCGATGACAATGTCTTGGTGGACACCACTGGTTGCTTCTAG 1272 0.4741 MKAEMKDGAPQVVMNHNGNHGKFSHLLASQDRDYLLSPTGAQVKVSDLEGKVVGLLFAANWYPPCRGFTQVLAGIYEELKSRVPQFEIVYVSSDEDLNAFNSFYGSMPWIAIPFSDLETKKSLTRKFDVEAVPCLILLQPDDRKEHATVRDGVELIYRYGIQAYPFSKDRLEQLQKEDKVKRDNQTLTNLLANHHRDYVLSHTHTGLKKVPVASLVGKTIGLYFSAEWCVPCAKFTPKLISVYEKIKHELAEKGEEDFEVVLISSDRDQASFDSYYSTMPWLALPFGDPEIKNLVRHYNVQGIPWLVIIGPDGKTITVHGRSLINLYQENAYPFTKAKVEELEKQLEEEAKGLPALVYHQGHRHDLNLVSDGNGGGPFICCVCDEQGSSWAYQCLQCGYEVHPKCVRTVERDDNVLVDTTGCF* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0188 423 ProSiteProfiles Thioredoxin domain profile. 157 351 IPR013766 -
Gso4g0188 423 SUPERFAMILY Cysteine-rich domain 352 407 IPR046349 -
Gso4g0188 423 Pfam C1 domain 361 406 IPR004146 -
Gso4g0188 423 Pfam Thioredoxin-like 50 141 IPR012336 -
Gso4g0188 423 Pfam Thioredoxin-like 217 314 IPR012336 -
Gso4g0188 423 PANTHER THIOREDOXIN 22 405 - -
Gso4g0188 423 SUPERFAMILY Thioredoxin-like 35 145 IPR036249 -
Gso4g0188 423 CDD TryX_like_TryX_NRX 197 334 IPR045870 GO:0004791
Gso4g0188 423 SUPERFAMILY Thioredoxin-like 198 319 IPR036249 -
Gso4g0188 423 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 361 413 IPR002219 -
Gso4g0188 423 Gene3D Glutaredoxin 26 167 - -
Gso4g0188 423 Gene3D Glutaredoxin 196 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0188 Gso-Chr4 1655402 1661909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0188 K17609 - gmx:100815038 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0188 4 1655402 1661909 Gso4g0188 4 1655402 1661909 ECH
Gso4g0188 4 1655402 1661909 Gso6g0171 6 1600209 1607385 GST