Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0170 ATGGCGAAAGGAAAGCATACGCATACCCGAGCACAGGGGAAGAAGTGGTCAACGTTCTCGCTGGTTCTGTGGGCGCTTTTCTTCCTCACACTCATCCTCGTCGTGCTCCTTGCTCTCGGCATTGTTTATCTTCCAACTACCGACGACGATTTTCCAACCACGGATCTCAGCGCCTTCAGGCGCAAGACCTCTCAAAGTGCCGAGAGTTTGGTGGAAAATCCGCCGGAGCAGTGGACCGAGATTCTCTCCTGGGAGCCTAGAGCGTTCATCTATCACAATTTTCTGTCAAAAGAAGAATGTGAGTACTTGATTGAACTTGCCAAACCTCAAATGGCAAAATCGAGTGTTGTTGATAGCAAGACTGGGAAGAGTACAGAAAGCAGGGTTCGAACCAGTTCAGGAATGTTCTTGAAGAGAGGAAAGGACAAAATTGTCCAGAATATAGAGAAAAGAATTGCTGACTTTACCTTCATACCTGAAGAGAATGGAGAAGGACTTCAAATTCTTCACTACGAAGTAGGACAAAAATATGAGCCTCACTATGATTACTTCCTTGATGAGTTCAACACTAAGAATGGAGGCCAACGTATTGCTACAGTTCTTATGTACCTTTCAGATGTTGAAGAAGGCGGTGAGACTGTATTTCCGGCTGCCAATGCAAATTTTAGTTCTGTGCCTTGGTGGAATGATTTATCCCAATGTGCAAGAAAGGGTCTCTCAGTGAAACCAAAAATGGGTGATGCTCTGCTATTTTGGAGCATGAGGCCTGATGCCACACTAGATCCATCTAGTTTACATGGTGGTTGCCCAGTAATTAAAGGAAATAAATGGTCTTCAACAAAGTGGATGCATCTTCGTGAGTACAAGGTTTGA 873 0.4467 MAKGKHTHTRAQGKKWSTFSLVLWALFFLTLILVVLLALGIVYLPTTDDDFPTTDLSAFRRKTSQSAESLVENPPEQWTEILSWEPRAFIYHNFLSKEECEYLIELAKPQMAKSSVVDSKTGKSTESRVRTSSGMFLKRGKDKIVQNIEKRIADFTFIPEENGEGLQILHYEVGQKYEPHYDYFLDEFNTKNGGQRIATVLMYLSDVEEGGETVFPAANANFSSVPWWNDLSQCARKGLSVKPKMGDALLFWSMRPDATLDPSSLHGGCPVIKGNKWSSTKWMHLREYKV* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0170 290 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 162 285 IPR005123 -
Gso6g0170 290 Gene3D q2cbj1_9rhob like domain 79 285 - -
Gso6g0170 290 PANTHER PROLYL 4-HYDROXYLASE 3-RELATED 5 290 - -
Gso6g0170 290 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 5 290 IPR045054 -
Gso6g0170 290 Pfam 2OG-Fe(II) oxygenase superfamily 166 284 IPR044862 -
Gso6g0170 290 SMART p4hc 86 284 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0170 Gso-Chr6 1585216 1589212 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0170 K00472 - gmx:100798201 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0186 4 1639124 1643602 Gso6g0170 6 1585216 1589212 GST