Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0186 ATGGCGAAAGGAAAGCATTCGCATACCCGCGCACAAGGGAAGAAGTGGTCAACGTTCTCGCTGGTTCTGTGGGCGCTTTTCTTCCTCACACTCATCCTCGTCGTGCTCCTTGCTCTCGGCATTGTTTATCTTCCAACCACCGACGACGATTTTCCAACCACGGAGCTCAGCGCCTTCAGGCGCAAGACCTCTCAAAGTGGCGAGAGTTTGGTGGAAAACTCGGAGCAGTGGACCGAGATTCTCTCCTGGGAGCCAAGAGCGTTCATCTATCACAATTTTCTGTCTAAAGAAGAATGTGAGTACTTGATTGAACTTGCCAAACCTCATATGGTAAAATCAAGTGTTGTTGATAGCAAGACTGGGAAGAGTACAGAAAGCAGGGTTCGAACCAGTTCAGGAATGTTCTTGAAGAGAGGAAGGGACAAAATCATCCAGAATATAGAGAAAAGAATTGCTGACTTTACCTTCATACCTGTAGAGAATGGAGAAGGACTTCAAATCCTTCACTATGAAGCAGGACAAAAATATGAGCCTCACTATGATTACTTCCTTGATGAGTTCAACACTAAGAATGGAGGCCAACGTATTGCTACAGTTCTTATGTACCTTTCAGATGTTGAAGAAGGCGGTGAGACTGTATTTCCTGCTGCCAATGCAAATTTTAGTTCTGTGCCTTGGTGGAATGATTTATCCCAATGTGCAAGAAAGGGTCTCTCAGTGAAACCAAAAATGGGTGATGCTCTGCTATTTTGGAGCATGAGGCCTGATGCCACTCTAGATCCATCTAGTTTACATGGCGGTTGCCCAGTAATTAAAGGAAATAAATGGTCTTCAACAAAGTGGCTGCATCTTCATGAGTACAAGGATTAA 870 0.446 MAKGKHSHTRAQGKKWSTFSLVLWALFFLTLILVVLLALGIVYLPTTDDDFPTTELSAFRRKTSQSGESLVENSEQWTEILSWEPRAFIYHNFLSKEECEYLIELAKPHMVKSSVVDSKTGKSTESRVRTSSGMFLKRGRDKIIQNIEKRIADFTFIPVENGEGLQILHYEAGQKYEPHYDYFLDEFNTKNGGQRIATVLMYLSDVEEGGETVFPAANANFSSVPWWNDLSQCARKGLSVKPKMGDALLFWSMRPDATLDPSSLHGGCPVIKGNKWSSTKWLHLHEYKD* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0186 289 Pfam 2OG-Fe(II) oxygenase superfamily 165 283 IPR044862 -
Gso4g0186 289 Gene3D q2cbj1_9rhob like domain 78 284 - -
Gso4g0186 289 PANTHER PROLYL 4-HYDROXYLASE 3-RELATED 5 288 - -
Gso4g0186 289 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 5 288 IPR045054 -
Gso4g0186 289 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 161 284 IPR005123 -
Gso4g0186 289 SMART p4hc 85 283 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0186 Gso-Chr4 1639124 1643602 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0186 K00472 - gmx:100818586 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0186 4 1639124 1643602 Gso4g0186 4 1639124 1643602 ECH
Gso4g0186 4 1639124 1643602 Gso6g0170 6 1585216 1589212 GST