Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0128 ATGGCCACCCACGCGGCTCTAGCTTCTACAAGGATCCCCACTAACACCAAGTTCCCATCCAAGGCTTCACACTCTTTCCCAACCCAATGCGCCTCAAAGAGACTTGAGGTGACAGAATTCTCTGGGCTAAGATCCACTTCATGTGTGACATATGCTAACGATGCTAGAGAATCTTCCTTTTTTGATCTTGTAGCTTCCCAACTCACTCCCAAGCAGACCAATGGATCATCAACTCCTGTGAGGGGAGAGACAGTGGCCAAGTTGAAGGTGGCAATCAATGGTTTCGGACGCATTGGTAGAAACTTCCTTCGCTGCTGGCACGGCCGAAAAGACTCACCCCTTGAGGTCGTTGTTGTCAACGACAGTGGTGGTGTCAAGAATGCTTCGCACCTGCTTAAATATGATTCCATGCTGGGAACTTTTAAAGCAGATGTGAAAATACTGGACAATGAAACCATCACTGTTGATGGTAAGCCCATCAAGGTTGTTTCAAGCAGGGACCCTCTTAAGCTTCCTTGGGCTGAACTTGGAATTGACATTGTTATTGAGGGAACCGGAGTGTTTGTGGATGGCCCTGGGGCTGGTAAACACATCCAAGCAGGTGCCAAGAAAGTTATTATCACTGCTCCTGCAAAGGGTGCTGATATTCCAACTTATGTTGTTGGTGTAAATGAAGGGGACTACACTCATCAGATCTCTAACATTATAAGCAACGCTTCCTGCACCACAAACTGTCTTGCTCCCTTTGTGAAGATCCTGGATGAAGAGTTTGGAATTGTGAAGGGAACCATGACAACCACACATTCCTACACAGGAGACCAGAGGCTTTTGGATGCTTCACACCGTGACTTGAGAAGAGCCAGGGCTGCAGCACTGAACATTGTCCCAACCAGCACTGGAGCTGCCAAGGCTGTGTCTCTAGTGTTGCCACAGCTGAAGGGCAAGCTTAATGGAATAGCGCTCCGTGTGCCTACACCCAATGTTTCAGTTGTTGACCTTGTTGTGAATGTTGAGAAGAAGGGTCTTACTGCTGAAGATGTGAATGCAGCATTCAGAAAGGCAGCTGAGGGTCCACTGAAAGGTGTGTTGGACGTGTGTGATGTTCCACTTGTGTCTATCGACTTCCGCTGCTCTGATGTTTCCTCTACTATTGACTCCTCCTTGACTATGGTCATGGGAGATGACATGGTTAAGGTGGTTGCTTGGTATGACAATGAATGGGGTTACAGCCAAAGGGTGGTGGATTTGGCACACCTAGTAGCAAGCAAGTGGCCAGGGGCAGCTAAAGCAGGGAGTGGAGACCCATTGGAGGAATTCTGCGAGACAAACCCTGCTGATGAGGAATGCAAAGTATATGAATAG 1362 0.4816 MATHAALASTRIPTNTKFPSKASHSFPTQCASKRLEVTEFSGLRSTSCVTYANDARESSFFDLVASQLTPKQTNGSSTPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVVNDSGGVKNASHLLKYDSMLGTFKADVKILDNETITVDGKPIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEGDYTHQISNIISNASCTTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGLTAEDVNAAFRKAAEGPLKGVLDVCDVPLVSIDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKWPGAAKAGSGDPLEEFCETNPADEECKVYE* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0128 453 MobiDBLite consensus disorder prediction 8 24 - -
Gso6g0128 453 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2 1 453 IPR020831 GO:0016620
Gso6g0128 453 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 241 404 - -
Gso6g0128 453 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 87 257 IPR036291 -
Gso6g0128 453 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 197 210 IPR020831 GO:0016620
Gso6g0128 453 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 235 253 IPR020831 GO:0016620
Gso6g0128 453 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 262 278 IPR020831 GO:0016620
Gso6g0128 453 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 318 335 IPR020831 GO:0016620
Gso6g0128 453 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 359 374 IPR020831 GO:0016620
Gso6g0128 453 MobiDBLite consensus disorder prediction 1 24 - -
Gso6g0128 453 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 89 190 IPR020828 GO:0051287
Gso6g0128 453 TIGRFAM GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 89 415 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Gso6g0128 453 Gene3D Dihydrodipicolinate Reductase; domain 2 240 405 - -
Gso6g0128 453 SMART gp_dh_n_7 88 241 IPR020828 GO:0051287
Gso6g0128 453 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPB, CHLOROPLASTIC 1 453 - -
Gso6g0128 453 Pfam CP12 domain 430 453 - -
Gso6g0128 453 Gene3D - 89 417 - -
Gso6g0128 453 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 239 246 IPR020830 GO:0016620
Gso6g0128 453 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 246 403 IPR020829 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0128 Gso-Chr6 1197235 1200358 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0128 K05298 - gmx:732571 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0140 4 1211013 1214272 Gso6g0128 6 1197235 1200358 GST