Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0125 ATGGCTAGGCGTCATGGATGGGAGCTCCCCTTTCACACTTTTCAGGTCGTGGCTATAACTGTATTTTTCTTGCTATCTATAGCATATTATGCTTTCTTTGCTCCTTTTCTTGGAAAGGACATCTATGAATATGTGGCTATTGGTGTTTACTCTGTATTGGCTCTCTCTGTGTTCTTTCTTTATGTTCGATGCACTGCCATTGATCCCGCCGACCAGGGAGTCATGGTTGATTGTGACAAGACATCAAAGAATAGATCAAAACTTGATGAAGAGTTGGCAGAACCCAGCAAGATGGGACTAAAGGGTGAAGGAATGTCTGATCGTCACAATTCAAGTTGGTGCTCTAAAGTTGGGTGTTTCTTCTGTAGTTTCCTTGTTAGAGAAGATTGCCGCAGTAATGAAGATATTAGTCTACAGCAACAATCTGGAGAAGAGGAGGCTTTGTTCTGCACTTTGTGCAATGCTGAGGTTCGGAAGTTCAGTAAGCATTGTCGAAGTTGTGACAAATGTGTTGATGGATTTGATCACCATTGTCGGTGGTTGAACAATTGTGTTGGAAAGAAGAATTACATCACGTTTGTGTGTCTTATGGCAGTGAGCCTAGTTTGGCTTATAGTTGAATGTGGAGTTGGGATTGCAGTACTTGTCAGATGCTTTGTTGACAAGAAAGGTACAGAGAATCAGATTGCTGAAAAACTTGGAGCTGGGTTCTCTCGAGTCCCATTTGCTATCATTGTGGCCATATGCACAGCAGTTTCATTCCTTGCAACTGTACCTTTGGGAGAGTTATTCTTTTTCCATATGATCCTGATACGAAAGGGTATCACAACTTACGAGTATGTTGTGGCCATGCGAACTCTAAGTGAACCACCTGGGCCTTCAGTTGATGGGGGTGAACAGCAGAGTCTACCATCGTCTCCTACTAGTTCAGCTATCACTGCAATAAGTGGAAGAAGCTCTGTTGGAATGAGTATACAGTACAAAGGTGCCTGGTGTACACCGCCAAGGATCTTTATGGACCACCCGGATGAAATTATACCACATTTGGAGCCAGGACGCCTACCATCCACTGTTGATCCAGATGCAGTACAATCACCTGACAAAGGGAGAAAAATGAACCAGCGCCCTGTGCGAATAAGTGCATGGAAACTTGCAAAATTGGATTCTAATGAGGCAACTAAGGCAGCAGCTAAGGCCAGAGCATCATCGTCTGTGCTTCGTCCTATTAGTTCTCGACCTCATGCATATGATGTGGATCATTTATCCAGTAGCAATGTGAGTGGAAGAAGCAGCCCAATTAGCAATCAAGGATTTCATATCAAATACGATACAGCGGGGACATCAAGGTTATCTCCTTCCAAGAGCTCATACCCTCCTAGTCATGCAAGCAAGGAAGACATCGATTCTTCATGTCAACACAGTATGAGTAACATTAGCAGTCCACAAGTCTCCAACCTTACTCCTTCACCAATGCAGAGGCCAAGTTTGAACAGAGACCATTTCAACCCCATGTATCAACAACCATCGGGAAATCAGTCTCCTTCGTCAGGTAAAGGAATTGAAGGGAACACAAATCCAGTTCACGACAATGTGGCACGTGCACCAATGAGAAGCAACACCTTAGGTGTTTCAGATAATAGAAGATCGTCTGTGTTTTGGGATCAAGAAGCTGGACGCTTTGTCTCATCCTCATCAAGAGGTCCCGGCAGTTCTCAGATTCCCGGAACAGAGTTATTGTACACGGGCCGTTCTATATTTTTTGGCAGCCCCGTTGTGAATGAACAGCCAAGTACGGGAACAAGAAGTAGCAGTTCAGTAGTAGCTGGTATTCCGGATAGAGATTCTTCTACATTAAGGGATTTTCAGCAAGGTAGATCACATAGGGGTGGCCAGCTTCCTGTGTTTGTTCCTGGCTATGCCCAGCAAAACAAGTTCCCTTAG 1941 0.4436 MARRHGWELPFHTFQVVAITVFFLLSIAYYAFFAPFLGKDIYEYVAIGVYSVLALSVFFLYVRCTAIDPADQGVMVDCDKTSKNRSKLDEELAEPSKMGLKGEGMSDRHNSSWCSKVGCFFCSFLVREDCRSNEDISLQQQSGEEEALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGKKNYITFVCLMAVSLVWLIVECGVGIAVLVRCFVDKKGTENQIAEKLGAGFSRVPFAIIVAICTAVSFLATVPLGELFFFHMILIRKGITTYEYVVAMRTLSEPPGPSVDGGEQQSLPSSPTSSAITAISGRSSVGMSIQYKGAWCTPPRIFMDHPDEIIPHLEPGRLPSTVDPDAVQSPDKGRKMNQRPVRISAWKLAKLDSNEATKAAAKARASSSVLRPISSRPHAYDVDHLSSSNVSGRSSPISNQGFHIKYDTAGTSRLSPSKSSYPPSHASKEDIDSSCQHSMSNISSPQVSNLTPSPMQRPSLNRDHFNPMYQQPSGNQSPSSGKGIEGNTNPVHDNVARAPMRSNTLGVSDNRRSSVFWDQEAGRFVSSSSRGPGSSQIPGTELLYTGRSIFFGSPVVNEQPSTGTRSSSSVVAGIPDRDSSTLRDFQQGRSHRGGQLPVFVPGYAQQNKFP* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0125 646 ProSiteProfiles DHHC domain profile. 148 198 - -
Gso6g0125 646 MobiDBLite consensus disorder prediction 349 375 - -
Gso6g0125 646 Pfam DHHC palmitoyltransferase 145 282 IPR001594 GO:0016409
Gso6g0125 646 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 9 487 - -
Gso6g0125 646 MobiDBLite consensus disorder prediction 591 646 - -
Gso6g0125 646 MobiDBLite consensus disorder prediction 417 523 - -
Gso6g0125 646 MobiDBLite consensus disorder prediction 291 311 - -
Gso6g0125 646 MobiDBLite consensus disorder prediction 415 544 - -
Gso6g0125 646 MobiDBLite consensus disorder prediction 591 611 - -
Gso6g0125 646 PANTHER PROTEIN S-ACYLTRANSFERASE 21 9 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0125 Gso-Chr6 1169404 1175540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0125 149 279 Lipid Metabolism Gene Families AT4G22750 28.244 1.21e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0125 K20027 - gmx:100818808 1280.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0137 4 1187702 1194009 Gso6g0125 6 1169404 1175540 GST